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  5. LOC_Os07g01870

LOC_Os07g01870


Description : ribosomal protein L13, putative, expressed


Gene families : OG_42_0002020 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002020_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os07g01870
Cluster HCCA clusters: cluster_0120

Target Alias Description ECC score Gene Family Method Actions
Bradi1g08260 No alias Ribosomal protein L13 family protein 0.03 Orthogroups_2024-Update
Mp2g08690.1 No alias component RPL13a of LSU proteome component 0.02 Orthogroups_2024-Update
Seita.9G087700.1 No alias component *(uL13) of large ribosomal-subunit (LSU) proteome 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA InterProScan predictions
CC GO:0005840 ribosome IEA InterProScan predictions
BP GO:0006412 translation IEA InterProScan predictions
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Type GO Term Name Evidence Source
CC GO:0000159 protein phosphatase type 2A complex IEP Predicted GO
MF GO:0003700 DNA-binding transcription factor activity IEP Predicted GO
MF GO:0003746 translation elongation factor activity IEP Predicted GO
MF GO:0004751 ribose-5-phosphate isomerase activity IEP Predicted GO
BP GO:0006081 cellular aldehyde metabolic process IEP Predicted GO
BP GO:0006414 translational elongation IEP Predicted GO
CC GO:0008287 protein serine/threonine phosphatase complex IEP Predicted GO
BP GO:0009052 pentose-phosphate shunt, non-oxidative branch IEP Predicted GO
MF GO:0016860 intramolecular oxidoreductase activity IEP Predicted GO
MF GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses IEP Predicted GO
MF GO:0019208 phosphatase regulator activity IEP Predicted GO
BP GO:0019682 glyceraldehyde-3-phosphate metabolic process IEP Predicted GO
MF GO:0019888 protein phosphatase regulator activity IEP Predicted GO
MF GO:0030234 enzyme regulator activity IEP Predicted GO
BP GO:0050789 regulation of biological process IEP Predicted GO
BP GO:0050794 regulation of cellular process IEP Predicted GO
MF GO:0098772 molecular function regulator IEP Predicted GO
MF GO:0140110 transcription regulator activity IEP Predicted GO
CC GO:1903293 phosphatase complex IEP Predicted GO
InterPro domains Description Start Stop
IPR005822 Ribosomal_L13 12 119
No external refs found!