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Description : tetratricopeptide repeat domain containing protein, expressed
Gene families : OG_42_0007724 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0007724_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Oryza release: LOC_Os07g02300 | |
| Cluster | HCCA clusters: cluster_0050 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Cre01.g021450 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.01 | Orthogroups_2024-Update | |
| Glyma.17G164600 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.03 | Orthogroups_2024-Update | |
| HORVU2Hr1G063340.8 | No alias | regulatory protein *(SRFR) of TNL-mediated... | 0.04 | Orthogroups_2024-Update | |
| Solyc02g092780 | No alias | Tetratricopeptide repeat protein, tpr, putative (AHRD... | 0.02 | Orthogroups_2024-Update | |
| evm.model.tig00000237.28 | No alias | (at4g37460 : 137.0) Encodes a tetratricopeptide repeat... | 0.01 | Orthogroups_2024-Update |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0005515 | protein binding | IEA | InterProScan predictions |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003723 | RNA binding | IEP | Predicted GO |
| MF | GO:0003774 | motor activity | IEP | Predicted GO |
| MF | GO:0004565 | beta-galactosidase activity | IEP | Predicted GO |
| MF | GO:0005096 | GTPase activator activity | IEP | Predicted GO |
| BP | GO:0006354 | DNA-templated transcription, elongation | IEP | Predicted GO |
| BP | GO:0006368 | transcription elongation from RNA polymerase II promoter | IEP | Predicted GO |
| BP | GO:0006397 | mRNA processing | IEP | Predicted GO |
| BP | GO:0006511 | ubiquitin-dependent protein catabolic process | IEP | Predicted GO |
| CC | GO:0008023 | transcription elongation factor complex | IEP | Predicted GO |
| MF | GO:0008408 | 3'-5' exonuclease activity | IEP | Predicted GO |
| BP | GO:0009057 | macromolecule catabolic process | IEP | Predicted GO |
| CC | GO:0009341 | beta-galactosidase complex | IEP | Predicted GO |
| MF | GO:0015925 | galactosidase activity | IEP | Predicted GO |
| BP | GO:0016071 | mRNA metabolic process | IEP | Predicted GO |
| CC | GO:0016459 | myosin complex | IEP | Predicted GO |
| CC | GO:0016593 | Cdc73/Paf1 complex | IEP | Predicted GO |
| BP | GO:0017006 | protein-tetrapyrrole linkage | IEP | Predicted GO |
| BP | GO:0017007 | protein-bilin linkage | IEP | Predicted GO |
| BP | GO:0017009 | protein-phycocyanobilin linkage | IEP | Predicted GO |
| BP | GO:0019941 | modification-dependent protein catabolic process | IEP | Predicted GO |
| MF | GO:0030145 | manganese ion binding | IEP | Predicted GO |
| MF | GO:0031072 | heat shock protein binding | IEP | Predicted GO |
| MF | GO:0031625 | ubiquitin protein ligase binding | IEP | Predicted GO |
| BP | GO:0043632 | modification-dependent macromolecule catabolic process | IEP | Predicted GO |
| BP | GO:0044265 | cellular macromolecule catabolic process | IEP | Predicted GO |
| MF | GO:0044389 | ubiquitin-like protein ligase binding | IEP | Predicted GO |
| BP | GO:0051603 | proteolysis involved in cellular protein catabolic process | IEP | Predicted GO |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR019734 | TPR_repeat | 503 | 532 |
| No external refs found! |