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  5. LOC_Os07g04840

LOC_Os07g04840


Description : PsbP, putative, expressed


Gene families : OG_42_0003661 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0003661_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os07g04840
Cluster HCCA clusters: cluster_0094

Target Alias Description ECC score Gene Family Method Actions
A4A49_25930 No alias oxygen-evolving enhancer protein 2-1, chloroplastic 0.03 Orthogroups_2024-Update
A4A49_63454 No alias oxygen-evolving enhancer protein 2-2, chloroplastic 0.04 Orthogroups_2024-Update
Bradi1g58160 No alias photosystem II subunit P-1 0.05 Orthogroups_2024-Update
Brara.H02952.1 No alias component *(PsbP) of PS-II oxygen-evolving center 0.06 Orthogroups_2024-Update
Brara.I05398.1 No alias component *(PsbP) of PS-II oxygen-evolving center 0.07 Orthogroups_2024-Update
Brara.J00459.1 No alias component *(PsbP) of PS-II oxygen-evolving center 0.07 Orthogroups_2024-Update
Cre12.g550850 No alias photosystem II subunit P-1 0.03 Orthogroups_2024-Update
Glyma.02G282500 No alias photosystem II subunit P-1 0.06 Orthogroups_2024-Update
Glyma.08G304200 No alias photosystem II subunit P-1 0.05 Orthogroups_2024-Update
Glyma.14G031800 No alias photosystem II subunit P-1 0.03 Orthogroups_2024-Update
Glyma.18G114900 No alias photosystem II subunit P-1 0.05 Orthogroups_2024-Update
HORVU2Hr1G060880.1 No alias component *(PsbP) of PS-II oxygen-evolving center 0.04 Orthogroups_2024-Update
Kfl00239_0120 kfl00239_0120_v1.1 (at1g06680 : 244.0) Encodes a 23 kD extrinsic protein... 0.06 Orthogroups_2024-Update
MA_3005g0010 No alias (q9slq8|psbp_cucsa : 229.0) Oxygen-evolving enhancer... 0.05 Orthogroups_2024-Update
Mp5g20290.1 No alias component PsbP of PS-II oxygen-evolving center 0.03 Orthogroups_2024-Update
Pp1s11_39V6 No alias oxygen-evolving enhancer protein chloroplast 0.05 Orthogroups_2024-Update
Pp1s135_79V6 No alias oxygen-evolving enhancer protein chloroplast 0.05 Orthogroups_2024-Update
Pp1s63_71V6 No alias oxygen-evolving enhancer protein chloroplast 0.05 Orthogroups_2024-Update
Pp1s75_141V6 No alias oxygen-evolving enhancer protein chloroplast 0.09 Orthogroups_2024-Update
Seita.4G207000.1 No alias component *(PsbP) of PS-II oxygen-evolving center 0.09 Orthogroups_2024-Update
Sobic.002G030200.1 No alias component *(PsbP) of PS-II oxygen-evolving center 0.08 Orthogroups_2024-Update
Solyc07g044860 No alias psbXphotosystem II 23 kDa protein 0.03 Orthogroups_2024-Update
Sopen07g023420 No alias PsbP 0.05 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA InterProScan predictions
CC GO:0009523 photosystem II IEA InterProScan predictions
CC GO:0009654 photosystem II oxygen evolving complex IEA InterProScan predictions
BP GO:0015979 photosynthesis IEA InterProScan predictions
CC GO:0019898 extrinsic component of membrane IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003839 gamma-glutamylcyclotransferase activity IEP Predicted GO
MF GO:0004089 carbonate dehydratase activity IEP Predicted GO
MF GO:0004175 endopeptidase activity IEP Predicted GO
MF GO:0004222 metalloendopeptidase activity IEP Predicted GO
MF GO:0004427 inorganic diphosphatase activity IEP Predicted GO
MF GO:0005543 phospholipid binding IEP Predicted GO
BP GO:0006575 cellular modified amino acid metabolic process IEP Predicted GO
BP GO:0006720 isoprenoid metabolic process IEP Predicted GO
BP GO:0006749 glutathione metabolic process IEP Predicted GO
BP GO:0006751 glutathione catabolic process IEP Predicted GO
BP GO:0006790 sulfur compound metabolic process IEP Predicted GO
MF GO:0008237 metallopeptidase activity IEP Predicted GO
BP GO:0008299 isoprenoid biosynthetic process IEP Predicted GO
CC GO:0009507 chloroplast IEP Predicted GO
CC GO:0009522 photosystem I IEP Predicted GO
CC GO:0009536 plastid IEP Predicted GO
MF GO:0009678 hydrogen-translocating pyrophosphatase activity IEP Predicted GO
BP GO:0010109 regulation of photosynthesis IEP Predicted GO
BP GO:0010207 photosystem II assembly IEP Predicted GO
MF GO:0010242 oxygen evolving activity IEP Predicted GO
MF GO:0015298 solute:cation antiporter activity IEP Predicted GO
MF GO:0015299 solute:proton antiporter activity IEP Predicted GO
BP GO:0016226 iron-sulfur cluster assembly IEP Predicted GO
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP Predicted GO
MF GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor IEP Predicted GO
MF GO:0016829 lyase activity IEP Predicted GO
MF GO:0016836 hydro-lyase activity IEP Predicted GO
MF GO:0016840 carbon-nitrogen lyase activity IEP Predicted GO
MF GO:0016842 amidine-lyase activity IEP Predicted GO
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP Predicted GO
BP GO:0022607 cellular component assembly IEP Predicted GO
MF GO:0022804 active transmembrane transporter activity IEP Predicted GO
BP GO:0031163 metallo-sulfur cluster assembly IEP Predicted GO
MF GO:0033743 peptide-methionine (R)-S-oxide reductase activity IEP Predicted GO
MF GO:0035091 phosphatidylinositol binding IEP Predicted GO
BP GO:0042219 cellular modified amino acid catabolic process IEP Predicted GO
BP GO:0042548 regulation of photosynthesis, light reaction IEP Predicted GO
BP GO:0042549 photosystem II stabilization IEP Predicted GO
BP GO:0043171 peptide catabolic process IEP Predicted GO
BP GO:0043467 regulation of generation of precursor metabolites and energy IEP Predicted GO
BP GO:0044273 sulfur compound catabolic process IEP Predicted GO
BP GO:0051186 cofactor metabolic process IEP Predicted GO
BP GO:0051187 cofactor catabolic process IEP Predicted GO
BP GO:1901565 organonitrogen compound catabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR002683 PsbP 84 253
No external refs found!