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Description : expressed protein
Gene families : OG_42_0000001 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Oryza release: LOC_Os07g05560 | |
| Cluster | HCCA clusters: cluster_0091 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| A4A49_26813 | No alias | putative pentatricopeptide repeat-containing protein,... | 0.02 | Orthogroups_2024-Update | |
| At1g13410 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein... | 0.03 | Orthogroups_2024-Update | |
| At1g20230 | No alias | Pentatricopeptide repeat-containing protein At1g20230... | 0.02 | Orthogroups_2024-Update | |
| At1g77170 | No alias | Pentatricopeptide repeat-containing protein At1g77170,... | 0.02 | Orthogroups_2024-Update | |
| At2g33760 | No alias | Pentatricopeptide repeat-containing protein At2g33760... | 0.02 | Orthogroups_2024-Update | |
| At3g13880 | No alias | Pentatricopeptide repeat-containing protein At3g13880... | 0.02 | Orthogroups_2024-Update | |
| At4g14820 | No alias | Pentatricopeptide repeat-containing protein At4g14820... | 0.02 | Orthogroups_2024-Update | |
| Bradi1g49477 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.03 | Orthogroups_2024-Update | |
| Bradi5g01440 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.03 | Orthogroups_2024-Update | |
| Bradi5g14000 | No alias | Pentatricopeptide repeat (PPR-like) superfamily protein | 0.03 | Orthogroups_2024-Update | |
| Glyma.08G294900 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.02 | Orthogroups_2024-Update | |
| Glyma.13G001700 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.02 | Orthogroups_2024-Update | |
| Glyma.16G172800 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.02 | Orthogroups_2024-Update | |
| HORVU2Hr1G053030.5 | No alias | Unknown function | 0.02 | Orthogroups_2024-Update | |
| HORVU5Hr1G056450.2 | No alias | Unknown function | 0.02 | Orthogroups_2024-Update | |
| MA_10429837g0010 | No alias | (at1g11290 : 623.0) Pentatricopeptide Repeat Protein... | 0.03 | Orthogroups_2024-Update | |
| MA_28607g0010 | No alias | (at4g02750 : 763.0) Tetratricopeptide repeat (TPR)-like... | 0.03 | Orthogroups_2024-Update | |
| MA_41676g0020 | No alias | (at3g24000 : 462.0) Tetratricopeptide repeat (TPR)-like... | 0.02 | Orthogroups_2024-Update | |
| PSME_00005903-RA | No alias | (at2g22070 : 612.0) pentatricopeptide (PPR)... | 0.02 | Orthogroups_2024-Update | |
| PSME_00026226-RA | No alias | (at3g46790 : 588.0) Encodes a member of a PCMP (plant... | 0.02 | Orthogroups_2024-Update | |
| PSME_00044871-RA | No alias | (at2g39620 : 426.0) Pentatricopeptide repeat (PPR)... | 0.02 | Orthogroups_2024-Update | |
| PSME_00045505-RA | No alias | (at2g22070 : 613.0) pentatricopeptide (PPR)... | 0.02 | Orthogroups_2024-Update | |
| PSME_00048766-RA | No alias | (at4g02750 : 577.0) Tetratricopeptide repeat (TPR)-like... | 0.02 | Orthogroups_2024-Update | |
| PSME_00056153-RA | No alias | (at2g13600 : 519.0) Pentatricopeptide repeat (PPR)... | 0.02 | Orthogroups_2024-Update | |
| PSME_00057058-RA | No alias | (at3g12770 : 592.0) Encodes a pentatricopeptide repeat... | 0.02 | Orthogroups_2024-Update | |
| Potri.002G245200 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.02 | Orthogroups_2024-Update | |
| Solyc01g020340 | No alias | Pentatricopeptide repeat-containing protein (AHRD V3.3... | 0.03 | Orthogroups_2024-Update | |
| Solyc03g096610 | No alias | Pentatricopeptide repeat (PPR) superfamily protein (AHRD... | 0.02 | Orthogroups_2024-Update | |
| Solyc07g008480 | No alias | Pentatricopeptide repeat-containing protein (AHRD V3.3... | 0.03 | Orthogroups_2024-Update | |
| Sopen11g024580 | No alias | PPR repeat family | 0.02 | Orthogroups_2024-Update |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0008270 | zinc ion binding | IEA | InterProScan predictions |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0000159 | protein phosphatase type 2A complex | IEP | Predicted GO |
| MF | GO:0008168 | methyltransferase activity | IEP | Predicted GO |
| MF | GO:0008173 | RNA methyltransferase activity | IEP | Predicted GO |
| CC | GO:0008287 | protein serine/threonine phosphatase complex | IEP | Predicted GO |
| MF | GO:0016741 | transferase activity, transferring one-carbon groups | IEP | Predicted GO |
| MF | GO:0019208 | phosphatase regulator activity | IEP | Predicted GO |
| MF | GO:0019888 | protein phosphatase regulator activity | IEP | Predicted GO |
| CC | GO:1903293 | phosphatase complex | IEP | Predicted GO |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002885 | Pentatricopeptide_repeat | 327 | 350 |
| IPR002885 | Pentatricopeptide_repeat | 185 | 211 |
| IPR002885 | Pentatricopeptide_repeat | 287 | 316 |
| IPR002885 | Pentatricopeptide_repeat | 155 | 181 |
| IPR002885 | Pentatricopeptide_repeat | 362 | 383 |
| IPR002885 | Pentatricopeptide_repeat | 258 | 280 |
| IPR032867 | DYW_dom | 458 | 582 |
| No external refs found! |