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  5. LOC_Os07g06620

LOC_Os07g06620


Description : YABBY domain containing protein, putative, expressed


Gene families : OG_42_0000538 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000538_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os07g06620
Cluster HCCA clusters: cluster_0145

Target Alias Description ECC score Gene Family Method Actions
Brara.I05306.1 No alias transcription factor *(YABBY) 0.03 Orthogroups_2024-Update
GRMZM2G102218 No alias Plant-specific transcription factor YABBY family protein 0.02 Orthogroups_2024-Update
Glyma.05G056000 No alias Plant-specific transcription factor YABBY family protein 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0007275 multicellular organism development IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEP Predicted GO
MF GO:0003951 NAD+ kinase activity IEP Predicted GO
MF GO:0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity IEP Predicted GO
MF GO:0005198 structural molecule activity IEP Predicted GO
CC GO:0005739 mitochondrion IEP Predicted GO
CC GO:0005840 ribosome IEP Predicted GO
BP GO:0006412 translation IEP Predicted GO
BP GO:0006518 peptide metabolic process IEP Predicted GO
BP GO:0006739 NADP metabolic process IEP Predicted GO
BP GO:0006741 NADP biosynthetic process IEP Predicted GO
MF GO:0016645 oxidoreductase activity, acting on the CH-NH group of donors IEP Predicted GO
MF GO:0016646 oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor IEP Predicted GO
BP GO:0019725 cellular homeostasis IEP Predicted GO
MF GO:0019843 rRNA binding IEP Predicted GO
BP GO:0043043 peptide biosynthetic process IEP Predicted GO
CC GO:0043228 non-membrane-bounded organelle IEP Predicted GO
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Predicted GO
BP GO:0043603 cellular amide metabolic process IEP Predicted GO
BP GO:0043604 amide biosynthetic process IEP Predicted GO
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Predicted GO
CC GO:0044444 cytoplasmic part IEP Predicted GO
BP GO:0045454 cell redox homeostasis IEP Predicted GO
BP GO:1901566 organonitrogen compound biosynthetic process IEP Predicted GO
CC GO:1990904 ribonucleoprotein complex IEP Predicted GO
InterPro domains Description Start Stop
IPR006780 YABBY 6 157
No external refs found!