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  5. LOC_Os07g08430

LOC_Os07g08430


Description : indole-3-glycerol phosphate lyase, chloroplast precursor, putative, expressed


Gene families : OG_42_0003100 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0003100_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os07g08430
Cluster HCCA clusters: cluster_0141

Target Alias Description ECC score Gene Family Method Actions
At3g54640 No alias Tryptophan synthase alpha chain, chloroplastic... 0.03 Orthogroups_2024-Update
Bradi1g55440 No alias Aldolase-type TIM barrel family protein 0.03 Orthogroups_2024-Update
Sobic.001G056400.1 No alias subunit alpha of tryptophan synthase complex 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004834 tryptophan synthase activity IEA InterProScan predictions
BP GO:0006568 tryptophan metabolic process IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEP Predicted GO
MF GO:0004435 phosphatidylinositol phospholipase C activity IEP Predicted GO
MF GO:0004620 phospholipase activity IEP Predicted GO
MF GO:0004629 phospholipase C activity IEP Predicted GO
MF GO:0004673 protein histidine kinase activity IEP Predicted GO
CC GO:0005783 endoplasmic reticulum IEP Predicted GO
BP GO:0006457 protein folding IEP Predicted GO
BP GO:0007165 signal transduction IEP Predicted GO
MF GO:0008081 phosphoric diester hydrolase activity IEP Predicted GO
MF GO:0008107 galactoside 2-alpha-L-fucosyltransferase activity IEP Predicted GO
MF GO:0008417 fucosyltransferase activity IEP Predicted GO
BP GO:0009314 response to radiation IEP Predicted GO
BP GO:0009416 response to light stimulus IEP Predicted GO
BP GO:0009581 detection of external stimulus IEP Predicted GO
BP GO:0009582 detection of abiotic stimulus IEP Predicted GO
BP GO:0009583 detection of light stimulus IEP Predicted GO
BP GO:0009584 detection of visible light IEP Predicted GO
BP GO:0009605 response to external stimulus IEP Predicted GO
BP GO:0009628 response to abiotic stimulus IEP Predicted GO
CC GO:0016272 prefoldin complex IEP Predicted GO
MF GO:0016298 lipase activity IEP Predicted GO
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP Predicted GO
BP GO:0018298 protein-chromophore linkage IEP Predicted GO
MF GO:0031127 alpha-(1,2)-fucosyltransferase activity IEP Predicted GO
BP GO:0042546 cell wall biogenesis IEP Predicted GO
BP GO:0044085 cellular component biogenesis IEP Predicted GO
MF GO:0051082 unfolded protein binding IEP Predicted GO
BP GO:0051606 detection of stimulus IEP Predicted GO
InterPro domains Description Start Stop
IPR002028 Trp_synthase_suA 72 327
No external refs found!