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  5. LOC_Os07g09420

LOC_Os07g09420


Description : ATPase, putative, expressed


Gene families : OG_42_0000080 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000080_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os07g09420
Cluster HCCA clusters: cluster_0084

Target Alias Description ECC score Gene Family Method Actions
Bradi1g26100 No alias cytochrome BC1 synthesis 0.01 Orthogroups_2024-Update
Bradi1g54760 No alias P-loop containing nucleoside triphosphate hydrolases... 0.02 Orthogroups_2024-Update
Bradi1g54800 No alias AAA-ATPase 1 0.04 Orthogroups_2024-Update
Bradi4g30930 No alias P-loop containing nucleoside triphosphate hydrolases... 0.03 Orthogroups_2024-Update
Brara.I03433.1 No alias Unknown function 0.02 Orthogroups_2024-Update
GRMZM2G444560 No alias P-loop containing nucleoside triphosphate hydrolases... 0.03 Orthogroups_2024-Update
Glyma.12G229000 No alias cytochrome BC1 synthesis 0.03 Orthogroups_2024-Update
Glyma.18G254100 No alias AAA-ATPase 1 0.01 Orthogroups_2024-Update
Glyma.19G018600 No alias AAA-ATPase 1 0.04 Orthogroups_2024-Update
Kfl00241_0050 kfl00241_0050_v1.1 (at3g50940 : 120.0) P-loop containing nucleoside... 0.01 Orthogroups_2024-Update
MA_10435468g0010 No alias (at3g28510 : 210.0) P-loop containing nucleoside... 0.03 Orthogroups_2024-Update
MA_230170g0010 No alias (at3g28580 : 223.0) P-loop containing nucleoside... 0.03 Orthogroups_2024-Update
MA_69227g0010 No alias (at5g57480 : 537.0) P-loop containing nucleoside... 0.03 Orthogroups_2024-Update
PSME_00011756-RA No alias (at4g30250 : 363.0) P-loop containing nucleoside... 0.03 Orthogroups_2024-Update
Potri.007G020500 No alias P-loop containing nucleoside triphosphate hydrolases... 0.02 Orthogroups_2024-Update
Potri.007G020800 No alias P-loop containing nucleoside triphosphate hydrolases... 0.02 Orthogroups_2024-Update
Potri.008G177200 No alias P-loop containing nucleoside triphosphate hydrolases... 0.02 Orthogroups_2024-Update
Potri.T172000 No alias cytochrome BC1 synthesis 0.02 Orthogroups_2024-Update
Pp1s325_27V6 No alias atp binding 0.03 Orthogroups_2024-Update
Seita.2G213800.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.4G245200.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Sobic.003G235300.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.008G191300.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sopen04g034270 No alias Domain associated at C-terminal with AAA 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEP Predicted GO
MF GO:0004435 phosphatidylinositol phospholipase C activity IEP Predicted GO
MF GO:0004527 exonuclease activity IEP Predicted GO
MF GO:0004620 phospholipase activity IEP Predicted GO
MF GO:0004629 phospholipase C activity IEP Predicted GO
MF GO:0004721 phosphoprotein phosphatase activity IEP Predicted GO
MF GO:0005198 structural molecule activity IEP Predicted GO
CC GO:0005575 cellular_component IEP Predicted GO
CC GO:0005783 endoplasmic reticulum IEP Predicted GO
CC GO:0005840 ribosome IEP Predicted GO
BP GO:0006412 translation IEP Predicted GO
BP GO:0006518 peptide metabolic process IEP Predicted GO
BP GO:0006888 ER to Golgi vesicle-mediated transport IEP Predicted GO
MF GO:0008081 phosphoric diester hydrolase activity IEP Predicted GO
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP Predicted GO
MF GO:0008408 3'-5' exonuclease activity IEP Predicted GO
BP GO:0009058 biosynthetic process IEP Predicted GO
BP GO:0009059 macromolecule biosynthetic process IEP Predicted GO
CC GO:0016021 integral component of membrane IEP Predicted GO
MF GO:0016298 lipase activity IEP Predicted GO
BP GO:0016311 dephosphorylation IEP Predicted GO
MF GO:0019843 rRNA binding IEP Predicted GO
CC GO:0030120 vesicle coat IEP Predicted GO
CC GO:0030127 COPII vesicle coat IEP Predicted GO
CC GO:0031224 intrinsic component of membrane IEP Predicted GO
CC GO:0032991 protein-containing complex IEP Predicted GO
BP GO:0034645 cellular macromolecule biosynthetic process IEP Predicted GO
MF GO:0042578 phosphoric ester hydrolase activity IEP Predicted GO
BP GO:0043043 peptide biosynthetic process IEP Predicted GO
CC GO:0043226 organelle IEP Predicted GO
CC GO:0043228 non-membrane-bounded organelle IEP Predicted GO
CC GO:0043229 intracellular organelle IEP Predicted GO
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Predicted GO
BP GO:0043603 cellular amide metabolic process IEP Predicted GO
BP GO:0043604 amide biosynthetic process IEP Predicted GO
BP GO:0044249 cellular biosynthetic process IEP Predicted GO
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Predicted GO
CC GO:0044424 intracellular part IEP Predicted GO
CC GO:0044425 membrane part IEP Predicted GO
CC GO:0044433 cytoplasmic vesicle part IEP Predicted GO
CC GO:0044444 cytoplasmic part IEP Predicted GO
CC GO:0044464 cell part IEP Predicted GO
BP GO:1901566 organonitrogen compound biosynthetic process IEP Predicted GO
BP GO:1901576 organic substance biosynthetic process IEP Predicted GO
CC GO:1990904 ribonucleoprotein complex IEP Predicted GO
InterPro domains Description Start Stop
IPR025753 AAA_N_dom 42 135
IPR003959 ATPase_AAA_core 269 421
No external refs found!