Description : 40S ribosomal protein S15a, putative, expressed
Gene families : OG_42_0001161 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001161_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Oryza release: LOC_Os07g10720 | |
Cluster | HCCA clusters: cluster_0072 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
228163 | No alias | Ribosomal protein S8 family protein | 0.06 | Orthogroups_2024-Update | |
At5g59850 | No alias | AT1G07770 protein [Source:UniProtKB/TrEMBL;Acc:B9DI04] | 0.03 | Orthogroups_2024-Update | |
Bradi2g23110 | No alias | ribosomal protein S15A | 0.07 | Orthogroups_2024-Update | |
Bradi2g54450 | No alias | ribosomal protein S15A | 0.07 | Orthogroups_2024-Update | |
Brara.B01062.1 | No alias | component *(uS8) of small ribosomal-subunit (SSU) proteome | 0.08 | Orthogroups_2024-Update | |
Brara.C01067.1 | No alias | component *(uS8) of small ribosomal-subunit (SSU) proteome | 0.11 | Orthogroups_2024-Update | |
Brara.F00468.1 | No alias | component *(uS8) of small ribosomal-subunit (SSU) proteome | 0.09 | Orthogroups_2024-Update | |
Brara.H02910.1 | No alias | component *(uS8) of small ribosomal-subunit (SSU) proteome | 0.03 | Orthogroups_2024-Update | |
Brara.J01354.1 | No alias | component *(uS8) of small ribosomal-subunit (SSU) proteome | 0.03 | Orthogroups_2024-Update | |
Cre05.g234637 | No alias | Ribosomal protein S8 family protein | 0.08 | Orthogroups_2024-Update | |
GRMZM2G083497 | No alias | ribosomal protein S15A | 0.02 | Orthogroups_2024-Update | |
Glyma.07G255500 | No alias | ribosomal protein S15A | 0.06 | Orthogroups_2024-Update | |
Glyma.11G003600 | No alias | ribosomal protein S15A | 0.06 | Orthogroups_2024-Update | |
Glyma.11G003700 | No alias | ribosomal protein S15A | 0.06 | Orthogroups_2024-Update | |
Glyma.15G102550 | No alias | ribosomal protein S15A | 0.04 | Orthogroups_2024-Update | |
Glyma.17G018600 | No alias | ribosomal protein S15A | 0.08 | Orthogroups_2024-Update | |
HORVU1Hr1G072060.1 | No alias | component *(uS8) of small ribosomal-subunit (SSU) proteome | 0.03 | Orthogroups_2024-Update | |
HORVU3Hr1G086930.1 | No alias | component *(uS8) of small ribosomal-subunit (SSU) proteome | 0.04 | Orthogroups_2024-Update | |
Kfl00864_0040 | kfl00864_0040_v1.1 | (at5g59850 : 230.0) Ribosomal protein S8 family protein;... | 0.03 | Orthogroups_2024-Update | |
MA_10427318g0020 | No alias | (at3g46040 : 214.0) Regulated by TCP20.; ribosomal... | 0.03 | Orthogroups_2024-Update | |
MA_57835g0010 | No alias | (at3g46040 : 223.0) Regulated by TCP20.; ribosomal... | 0.07 | Orthogroups_2024-Update | |
Mp8g13010.1 | No alias | component RPS15a of SSU proteome | 0.02 | Orthogroups_2024-Update | |
PSME_00001830-RA | No alias | (at5g59850 : 244.0) Ribosomal protein S8 family protein;... | 0.02 | Orthogroups_2024-Update | |
PSME_00015526-RA | No alias | (at5g59850 : 244.0) Ribosomal protein S8 family protein;... | 0.02 | Orthogroups_2024-Update | |
Potri.001G118100 | No alias | ribosomal protein S15A | 0.03 | Orthogroups_2024-Update | |
Pp1s115_101V6 | No alias | 40s ribosomal protein s15a | 0.04 | Orthogroups_2024-Update | |
Pp1s1_304V6 | No alias | 40s ribosomal protein s15a | 0.04 | Orthogroups_2024-Update | |
Pp1s426_18V6 | No alias | 40s ribosomal protein s15a | 0.05 | Orthogroups_2024-Update | |
Pp1s45_88V6 | No alias | 40s ribosomal protein s15a | 0.05 | Orthogroups_2024-Update | |
Pp1s61_209V6 | No alias | 40s ribosomal protein s15a | 0.02 | Orthogroups_2024-Update | |
Seita.2G319400.1 | No alias | component *(uS8) of small ribosomal-subunit (SSU) proteome | 0.06 | Orthogroups_2024-Update | |
Seita.5G374600.1 | No alias | component *(uS8) of small ribosomal-subunit (SSU) proteome | 0.03 | Orthogroups_2024-Update | |
Sobic.003G012700.1 | No alias | component *(uS8) of small ribosomal-subunit (SSU) proteome | 0.05 | Orthogroups_2024-Update | |
Sobic.007G212600.1 | No alias | component *(uS8) of small ribosomal-subunit (SSU) proteome | 0.09 | Orthogroups_2024-Update | |
Sopen04g025860 | No alias | Ribosomal protein S8 | 0.06 | Orthogroups_2024-Update | |
Sopen04g026010 | No alias | Ribosomal protein S8 | 0.04 | Orthogroups_2024-Update | |
Sopen04g026020 | No alias | Ribosomal protein S8 | 0.07 | Orthogroups_2024-Update | |
evm.model.contig_2045.5 | No alias | (at5g59850 : 190.0) Ribosomal protein S8 family protein;... | 0.1 | Orthogroups_2024-Update | |
evm.model.tig00000158.110 | No alias | (q9at34|rs15a_dauca : 210.0) 40S ribosomal protein S15a... | 0.06 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003735 | structural constituent of ribosome | IEA | InterProScan predictions |
CC | GO:0005840 | ribosome | IEA | InterProScan predictions |
BP | GO:0006412 | translation | IEA | InterProScan predictions |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003723 | RNA binding | IEP | Predicted GO |
MF | GO:0003746 | translation elongation factor activity | IEP | Predicted GO |
MF | GO:0004061 | arylformamidase activity | IEP | Predicted GO |
MF | GO:0004425 | indole-3-glycerol-phosphate synthase activity | IEP | Predicted GO |
MF | GO:0004637 | phosphoribosylamine-glycine ligase activity | IEP | Predicted GO |
CC | GO:0005622 | intracellular | IEP | Predicted GO |
BP | GO:0006144 | purine nucleobase metabolic process | IEP | Predicted GO |
BP | GO:0006414 | translational elongation | IEP | Predicted GO |
BP | GO:0006448 | regulation of translational elongation | IEP | Predicted GO |
BP | GO:0006449 | regulation of translational termination | IEP | Predicted GO |
BP | GO:0006452 | translational frameshifting | IEP | Predicted GO |
BP | GO:0006568 | tryptophan metabolic process | IEP | Predicted GO |
BP | GO:0006569 | tryptophan catabolic process | IEP | Predicted GO |
BP | GO:0006576 | cellular biogenic amine metabolic process | IEP | Predicted GO |
BP | GO:0006586 | indolalkylamine metabolic process | IEP | Predicted GO |
MF | GO:0008097 | 5S rRNA binding | IEP | Predicted GO |
MF | GO:0008135 | translation factor activity, RNA binding | IEP | Predicted GO |
BP | GO:0009063 | cellular amino acid catabolic process | IEP | Predicted GO |
BP | GO:0009074 | aromatic amino acid family catabolic process | IEP | Predicted GO |
BP | GO:0009112 | nucleobase metabolic process | IEP | Predicted GO |
BP | GO:0009113 | purine nucleobase biosynthetic process | IEP | Predicted GO |
BP | GO:0009310 | amine catabolic process | IEP | Predicted GO |
BP | GO:0009891 | positive regulation of biosynthetic process | IEP | Predicted GO |
BP | GO:0009893 | positive regulation of metabolic process | IEP | Predicted GO |
MF | GO:0010181 | FMN binding | IEP | Predicted GO |
BP | GO:0010557 | positive regulation of macromolecule biosynthetic process | IEP | Predicted GO |
BP | GO:0010604 | positive regulation of macromolecule metabolic process | IEP | Predicted GO |
BP | GO:0010628 | positive regulation of gene expression | IEP | Predicted GO |
BP | GO:0016054 | organic acid catabolic process | IEP | Predicted GO |
MF | GO:0016810 | hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds | IEP | Predicted GO |
MF | GO:0016811 | hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides | IEP | Predicted GO |
BP | GO:0019441 | tryptophan catabolic process to kynurenine | IEP | Predicted GO |
MF | GO:0019843 | rRNA binding | IEP | Predicted GO |
BP | GO:0022613 | ribonucleoprotein complex biogenesis | IEP | Predicted GO |
BP | GO:0031325 | positive regulation of cellular metabolic process | IEP | Predicted GO |
BP | GO:0031328 | positive regulation of cellular biosynthetic process | IEP | Predicted GO |
BP | GO:0032270 | positive regulation of cellular protein metabolic process | IEP | Predicted GO |
BP | GO:0034250 | positive regulation of cellular amide metabolic process | IEP | Predicted GO |
BP | GO:0042180 | cellular ketone metabolic process | IEP | Predicted GO |
BP | GO:0042254 | ribosome biogenesis | IEP | Predicted GO |
BP | GO:0042402 | cellular biogenic amine catabolic process | IEP | Predicted GO |
BP | GO:0042430 | indole-containing compound metabolic process | IEP | Predicted GO |
BP | GO:0042436 | indole-containing compound catabolic process | IEP | Predicted GO |
BP | GO:0042440 | pigment metabolic process | IEP | Predicted GO |
BP | GO:0042537 | benzene-containing compound metabolic process | IEP | Predicted GO |
MF | GO:0043021 | ribonucleoprotein complex binding | IEP | Predicted GO |
MF | GO:0043022 | ribosome binding | IEP | Predicted GO |
BP | GO:0043243 | positive regulation of protein complex disassembly | IEP | Predicted GO |
BP | GO:0043244 | regulation of protein complex disassembly | IEP | Predicted GO |
BP | GO:0044106 | cellular amine metabolic process | IEP | Predicted GO |
BP | GO:0044282 | small molecule catabolic process | IEP | Predicted GO |
MF | GO:0044877 | protein-containing complex binding | IEP | Predicted GO |
BP | GO:0045727 | positive regulation of translation | IEP | Predicted GO |
BP | GO:0045901 | positive regulation of translational elongation | IEP | Predicted GO |
BP | GO:0045905 | positive regulation of translational termination | IEP | Predicted GO |
BP | GO:0046112 | nucleobase biosynthetic process | IEP | Predicted GO |
BP | GO:0046148 | pigment biosynthetic process | IEP | Predicted GO |
BP | GO:0046218 | indolalkylamine catabolic process | IEP | Predicted GO |
BP | GO:0046395 | carboxylic acid catabolic process | IEP | Predicted GO |
BP | GO:0048518 | positive regulation of biological process | IEP | Predicted GO |
BP | GO:0048522 | positive regulation of cellular process | IEP | Predicted GO |
BP | GO:0051128 | regulation of cellular component organization | IEP | Predicted GO |
BP | GO:0051130 | positive regulation of cellular component organization | IEP | Predicted GO |
BP | GO:0051173 | positive regulation of nitrogen compound metabolic process | IEP | Predicted GO |
BP | GO:0051247 | positive regulation of protein metabolic process | IEP | Predicted GO |
BP | GO:0070189 | kynurenine metabolic process | IEP | Predicted GO |
BP | GO:1901606 | alpha-amino acid catabolic process | IEP | Predicted GO |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR000630 | Ribosomal_S8 | 7 | 130 |
No external refs found! |