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  5. Solyc08g061990

Solyc08g061990


Description : LOW QUALITY:chromatin remodeling 31 (AHRD V3.3 *-* AT1G05490.1)


Gene families : OG_42_0000461 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000461_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc08g061990
Cluster HCCA clusters: Cluster_309

Target Alias Description ECC score Gene Family Method Actions
Bradi1g16720 No alias chromatin remodeling 38 0.02 Orthogroups_2024-Update
Solyc02g033050 No alias LOW QUALITY:chromatin remodeling 31 (AHRD V3.3 *-* AT1G05490.1) 0.04 Orthogroups_2024-Update
Solyc08g077600 No alias LOW QUALITY:chromatin remodeling 31 (AHRD V3.3 *-* AT1G05490.1) 0.03 Orthogroups_2024-Update
Sopen08g026150 No alias SNF2 family N-terminal domain 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003950 NAD+ ADP-ribosyltransferase activity IEP Predicted GO
MF GO:0003989 acetyl-CoA carboxylase activity IEP Predicted GO
BP GO:0006471 protein ADP-ribosylation IEP Predicted GO
CC GO:0009317 acetyl-CoA carboxylase complex IEP Predicted GO
MF GO:0016421 CoA carboxylase activity IEP Predicted GO
MF GO:0016763 transferase activity, transferring pentosyl groups IEP Predicted GO
MF GO:0016885 ligase activity, forming carbon-carbon bonds IEP Predicted GO
MF GO:0043531 ADP binding IEP Predicted GO
InterPro domains Description Start Stop
IPR000330 SNF2_N 46 107
No external refs found!