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  5. LOC_Os07g25430

LOC_Os07g25430


Description : photosystem I reaction center subunit IV A, chloroplast precursor, putative, expressed


Gene families : OG_42_0005311 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0005311_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os07g25430
Cluster HCCA clusters: cluster_0070

Target Alias Description ECC score Gene Family Method Actions
A4A49_36117 No alias photosystem i reaction center subunit iv b, chloroplastic 0.03 Orthogroups_2024-Update
At4g28750 No alias Photosystem I reaction center subunit IV A,... 0.04 Orthogroups_2024-Update
Brara.A00845.1 No alias component *(PsaE) of PS-I complex 0.07 Orthogroups_2024-Update
Brara.H01465.1 No alias component *(PsaE) of PS-I complex 0.07 Orthogroups_2024-Update
Cre10.g420350 No alias photosystem I subunit E-2 0.01 Orthogroups_2024-Update
Glyma.10G042000 No alias photosystem I subunit E-2 0.03 Orthogroups_2024-Update
Glyma.13G129400 No alias photosystem I subunit E-2 0.03 Orthogroups_2024-Update
Kfl00057_0180 kfl00057_0180_v1.1 (p12352|psae_chlre : 88.2) Photosystem I reaction center... 0.02 Orthogroups_2024-Update
Mp1g24020.1 No alias component PsaE of PS-I complex 0.02 Orthogroups_2024-Update
Pp1s101_2V6 No alias photosystem i reaction center subunit iv a 0.03 Orthogroups_2024-Update
Pp1s319_36V6 No alias photosystem i reaction center subunit iv a 0.02 Orthogroups_2024-Update
Pp1s334_17V6 No alias photosystem i reaction center subunit iv a 0.02 Orthogroups_2024-Update
Sobic.002G119500.3 No alias component *(PsaE) of PS-I complex 0.02 Orthogroups_2024-Update
Solyc06g083680 No alias Photosystem I reaction center subunit IV (AHRD V3.3 ***... 0.06 Orthogroups_2024-Update
Solyc09g063130 No alias Photosystem I reaction center subunit IV (AHRD V3.3 ***... 0.04 Orthogroups_2024-Update
Sopen06g035100 No alias Photosystem I reaction centre subunit IV / PsaE 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0009522 photosystem I IEA InterProScan predictions
CC GO:0009538 photosystem I reaction center IEA InterProScan predictions
BP GO:0015979 photosynthesis IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0004869 cysteine-type endopeptidase inhibitor activity IEP Predicted GO
BP GO:0006576 cellular biogenic amine metabolic process IEP Predicted GO
BP GO:0006835 dicarboxylic acid transport IEP Predicted GO
BP GO:0009309 amine biosynthetic process IEP Predicted GO
BP GO:0015711 organic anion transport IEP Predicted GO
BP GO:0015740 C4-dicarboxylate transport IEP Predicted GO
BP GO:0015743 malate transport IEP Predicted GO
BP GO:0015849 organic acid transport IEP Predicted GO
CC GO:0016020 membrane IEP Predicted GO
BP GO:0016053 organic acid biosynthetic process IEP Predicted GO
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP Predicted GO
MF GO:0030410 nicotianamine synthase activity IEP Predicted GO
BP GO:0030417 nicotianamine metabolic process IEP Predicted GO
BP GO:0030418 nicotianamine biosynthetic process IEP Predicted GO
BP GO:0042401 cellular biogenic amine biosynthetic process IEP Predicted GO
BP GO:0044106 cellular amine metabolic process IEP Predicted GO
BP GO:0044283 small molecule biosynthetic process IEP Predicted GO
BP GO:0046394 carboxylic acid biosynthetic process IEP Predicted GO
BP GO:0046942 carboxylic acid transport IEP Predicted GO
BP GO:0072350 tricarboxylic acid metabolic process IEP Predicted GO
BP GO:0072351 tricarboxylic acid biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR003375 PSI_PsaE 89 148
No external refs found!