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  5. LOC_Os07g25500

LOC_Os07g25500


Description : pentatricopeptide, putative, expressed


Gene families : OG_42_0006903 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0006903_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os07g25500
Cluster HCCA clusters: cluster_0095

Target Alias Description ECC score Gene Family Method Actions
Sobic.002G120200.1 No alias Unknown function 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP Predicted GO
MF GO:0005506 iron ion binding IEP Predicted GO
BP GO:0009116 nucleoside metabolic process IEP Predicted GO
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Predicted GO
BP GO:0018208 peptidyl-proline modification IEP Predicted GO
MF GO:0045735 nutrient reservoir activity IEP Predicted GO
BP GO:1901657 glycosyl compound metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 332 379
IPR002885 Pentatricopeptide_repeat 232 258
IPR002885 Pentatricopeptide_repeat 204 231
No external refs found!