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  5. Solyc08g062360

Solyc08g062360


Description : Ankyrin repeat family protein (AHRD V3.3 *** F8WLA0_CITUN)


Gene families : OG_42_0002718 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002718_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc08g062360
Cluster HCCA clusters: Cluster_239

Target Alias Description ECC score Gene Family Method Actions
Glyma.13G130300 No alias Ankyrin repeat family protein 0.03 Orthogroups_2024-Update
Glyma.16G005100 No alias Function unknown 0.03 Orthogroups_2024-Update
HORVU4Hr1G062330.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Potri.006G223800 No alias Ankyrin repeat family protein 0.05 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004222 metalloendopeptidase activity IEP Predicted GO
MF GO:0004525 ribonuclease III activity IEP Predicted GO
BP GO:0015985 energy coupled proton transport, down electrochemical gradient IEP Predicted GO
BP GO:0015986 ATP synthesis coupled proton transport IEP Predicted GO
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP Predicted GO
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP Predicted GO
MF GO:0017076 purine nucleotide binding IEP Predicted GO
CC GO:0031012 extracellular matrix IEP Predicted GO
MF GO:0032296 double-stranded RNA-specific ribonuclease activity IEP Predicted GO
MF GO:0032553 ribonucleotide binding IEP Predicted GO
MF GO:0032555 purine ribonucleotide binding IEP Predicted GO
CC GO:0044421 extracellular region part IEP Predicted GO
MF GO:0097367 carbohydrate derivative binding IEP Predicted GO
InterPro domains Description Start Stop
IPR020683 Ankyrin_rpt-contain_dom 7 94
IPR020683 Ankyrin_rpt-contain_dom 111 208
IPR026961 PGG_dom 279 399
No external refs found!