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  5. LOC_Os07g27490

LOC_Os07g27490


Description : Regulator of chromosome condensation domain containing protein, expressed


Gene families : OG_42_0006857 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0006857_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os07g27490
Cluster HCCA clusters: cluster_0028

Target Alias Description ECC score Gene Family Method Actions
At3g15430 No alias MJK13.9 protein [Source:UniProtKB/TrEMBL;Acc:Q9LDU3] 0.02 Orthogroups_2024-Update
Glyma.13G279000 No alias Regulator of chromosome condensation (RCC1) family protein 0.03 Orthogroups_2024-Update
MA_7451700g0010 No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
Sopen07g031470 No alias Regulator of chromosome condensation (RCC1) repeat 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005544 calcium-dependent phospholipid binding IEP Predicted GO
BP GO:0006810 transport IEP Predicted GO
MF GO:0008641 ubiquitin-like modifier activating enzyme activity IEP Predicted GO
BP GO:0015988 energy coupled proton transmembrane transport, against electrochemical gradient IEP Predicted GO
BP GO:0015991 ATP hydrolysis coupled proton transport IEP Predicted GO
MF GO:0016877 ligase activity, forming carbon-sulfur bonds IEP Predicted GO
CC GO:0033177 proton-transporting two-sector ATPase complex, proton-transporting domain IEP Predicted GO
CC GO:0033179 proton-transporting V-type ATPase, V0 domain IEP Predicted GO
CC GO:0044425 membrane part IEP Predicted GO
BP GO:0051179 localization IEP Predicted GO
BP GO:0051234 establishment of localization IEP Predicted GO
BP GO:0090662 ATP hydrolysis coupled transmembrane transport IEP Predicted GO
BP GO:0099131 ATP hydrolysis coupled ion transmembrane transport IEP Predicted GO
BP GO:0099132 ATP hydrolysis coupled cation transmembrane transport IEP Predicted GO
InterPro domains Description Start Stop
IPR000408 Reg_chr_condens 334 374
IPR000408 Reg_chr_condens 226 276
IPR000408 Reg_chr_condens 279 330
IPR000408 Reg_chr_condens 174 223
No external refs found!