Solyc08g062490

Description : WRKY transcription factor 50

Gene families : OG_42_0000005 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Solanum release: Solyc08g062490
Cluster	HCCA clusters: Cluster_183

Target	Alias	Description	ECC score	Gene Family Method
66769	No alias	WRKY family transcription factor family protein	0.02	Orthogroups_2024-Update
81371	No alias	WRKY DNA-binding protein 9	0.02	Orthogroups_2024-Update
At2g03340	No alias	Putative WRKY DNA-binding protein...	0.04	Orthogroups_2024-Update
Bradi1g63910	No alias	WRKY family transcription factor	0.02	Orthogroups_2024-Update
Bradi2g00280	No alias	WRKY DNA-binding protein 26	0.02	Orthogroups_2024-Update
Bradi2g08620	No alias	WRKY family transcription factor	0.03	Orthogroups_2024-Update
Bradi2g11170	No alias	WRKY family transcription factor	0.02	Orthogroups_2024-Update
Bradi4g01950	No alias	WRKY DNA-binding protein 33	0.02	Orthogroups_2024-Update
Bradi4g25717	No alias	WRKY DNA-binding protein 55	0.02	Orthogroups_2024-Update
Bradi4g30360	No alias	WRKY DNA-binding protein 40	0.03	Orthogroups_2024-Update
Brara.A01631.1	No alias	WRKY-type transcription factor	0.03	Orthogroups_2024-Update
Brara.B01768.1	No alias	WRKY-type transcription factor	0.03	Orthogroups_2024-Update
Brara.B03911.1	No alias	WRKY-type transcription factor	0.03	Orthogroups_2024-Update
Brara.C04691.1	No alias	WRKY-type transcription factor	0.03	Orthogroups_2024-Update
Brara.D02837.1	No alias	WRKY-type transcription factor	0.03	Orthogroups_2024-Update
Brara.E00945.1	No alias	WRKY-type transcription factor	0.03	Orthogroups_2024-Update
Brara.K00205.1	No alias	WRKY-type transcription factor	0.03	Orthogroups_2024-Update
GRMZM2G169966	No alias	WRKY DNA-binding protein 33	0.03	Orthogroups_2024-Update
GRMZM2G176489	No alias	WRKY DNA-binding protein 72	0.03	Orthogroups_2024-Update
GRMZM5G863420	No alias	WRKY DNA-binding protein 51	0.03	Orthogroups_2024-Update
GRMZM5G871347	No alias	WRKY family transcription factor	0.03	Orthogroups_2024-Update
Glyma.04G223300	No alias	WRKY DNA-binding protein 70	0.04	Orthogroups_2024-Update
Glyma.05G127600	No alias	WRKY DNA-binding protein 28	0.04	Orthogroups_2024-Update
Glyma.05G211900	No alias	WRKY family transcription factor	0.03	Orthogroups_2024-Update
Glyma.09G080000	No alias	WRKY family transcription factor	0.04	Orthogroups_2024-Update
HORVU0Hr1G012750.1	No alias	WRKY-type transcription factor	0.02	Orthogroups_2024-Update
HORVU1Hr1G090110.1	No alias	WRKY-type transcription factor	0.03	Orthogroups_2024-Update
HORVU3Hr1G086180.1	No alias	WRKY-type transcription factor	0.02	Orthogroups_2024-Update
LOC_Os02g08440	No alias	WRKY71, expressed	0.02	Orthogroups_2024-Update
MA_14480g0020	No alias	(at1g62300 : 173.0) Encodes a transcription factor...	0.02	Orthogroups_2024-Update
MA_6943842g0010	No alias	(at3g58710 : 149.0) member of WRKY Transcription Factor;...	0.03	Orthogroups_2024-Update
Mp4g00180.1	No alias	transcription factor (WRKY)	0.02	Orthogroups_2024-Update
PSME_00021156-RA	No alias	no hits & (original description: no original description)	0.04	Orthogroups_2024-Update
PSME_00035158-RA	No alias	(at3g01970 : 114.0) member of WRKY Transcription Factor;...	0.02	Orthogroups_2024-Update
PSME_00035159-RA	No alias	(at1g29860 : 115.0) member of WRKY Transcription Factor;...	0.03	Orthogroups_2024-Update
PSME_00036434-RA	No alias	(at1g62300 : 153.0) Encodes a transcription factor...	0.05	Orthogroups_2024-Update
PSME_00039003-RA	No alias	(at1g29860 : 112.0) member of WRKY Transcription Factor;...	0.03	Orthogroups_2024-Update
PSME_00039099-RA	No alias	(at3g01970 : 111.0) member of WRKY Transcription Factor;...	0.03	Orthogroups_2024-Update
PSME_00040625-RA	No alias	(at1g62300 : 128.0) Encodes a transcription factor...	0.03	Orthogroups_2024-Update
Potri.002G193000	No alias	WRKY DNA-binding protein 23	0.02	Orthogroups_2024-Update
Potri.004G072000	No alias	WRKY DNA-binding protein 27	0.02	Orthogroups_2024-Update
Potri.005G085200	No alias	WRKY DNA-binding protein 51	0.03	Orthogroups_2024-Update
Potri.006G105300	No alias	WRKY DNA-binding protein 33	0.03	Orthogroups_2024-Update
Potri.007G078200	No alias	WRKY DNA-binding protein 13	0.03	Orthogroups_2024-Update
Potri.010G160100	No alias	WRKY DNA-binding protein 57	0.03	Orthogroups_2024-Update
Potri.015G099200	No alias	WRKY DNA-binding protein 75	0.03	Orthogroups_2024-Update
Potri.017G149000	No alias	WRKY DNA-binding protein 27	0.03	Orthogroups_2024-Update
Seita.3G164900.1	No alias	WRKY-type transcription factor	0.04	Orthogroups_2024-Update
Seita.5G032600.1	No alias	WRKY-type transcription factor	0.04	Orthogroups_2024-Update
Seita.7G302500.1	No alias	WRKY-type transcription factor	0.03	Orthogroups_2024-Update
Sobic.001G389000.1	No alias	WRKY-type transcription factor	0.04	Orthogroups_2024-Update
Sobic.003G248400.1	No alias	WRKY-type transcription factor	0.04	Orthogroups_2024-Update
Sobic.009G247300.2	No alias	WRKY-type transcription factor	0.03	Orthogroups_2024-Update
Solyc01g079260	No alias	WRKY transcription factor 23	0.03	Orthogroups_2024-Update
Solyc08g067360	No alias	WRKY transcription factor 45	0.03	Orthogroups_2024-Update
Solyc10g005680	No alias	WRKY transcription factor 15	0.04	Orthogroups_2024-Update
Sopen01g047060	No alias	WRKY DNA -binding domain	0.03	Orthogroups_2024-Update
Sopen04g023070	No alias	WRKY DNA -binding domain	0.03	Orthogroups_2024-Update
Sopen05g007320	No alias	WRKY DNA -binding domain	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	InterProScan predictions
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	InterProScan predictions
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
MF	GO:0043565	sequence-specific DNA binding	IEA	InterProScan predictions
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003839	gamma-glutamylcyclotransferase activity	IEP	Predicted GO
MF	GO:0005516	calmodulin binding	IEP	Predicted GO
BP	GO:0006575	cellular modified amino acid metabolic process	IEP	Predicted GO
BP	GO:0006749	glutathione metabolic process	IEP	Predicted GO
BP	GO:0006751	glutathione catabolic process	IEP	Predicted GO
BP	GO:0006873	cellular ion homeostasis	IEP	Predicted GO
BP	GO:0006875	cellular metal ion homeostasis	IEP	Predicted GO
BP	GO:0006879	cellular iron ion homeostasis	IEP	Predicted GO
BP	GO:0007034	vacuolar transport	IEP	Predicted GO
MF	GO:0008199	ferric iron binding	IEP	Predicted GO
MF	GO:0016597	amino acid binding	IEP	Predicted GO
MF	GO:0016829	lyase activity	IEP	Predicted GO
MF	GO:0016840	carbon-nitrogen lyase activity	IEP	Predicted GO
MF	GO:0016842	amidine-lyase activity	IEP	Predicted GO
MF	GO:0019825	oxygen binding	IEP	Predicted GO
BP	GO:0030003	cellular cation homeostasis	IEP	Predicted GO
MF	GO:0031406	carboxylic acid binding	IEP	Predicted GO
BP	GO:0042219	cellular modified amino acid catabolic process	IEP	Predicted GO
BP	GO:0043171	peptide catabolic process	IEP	Predicted GO
MF	GO:0043177	organic acid binding	IEP	Predicted GO
BP	GO:0044273	sulfur compound catabolic process	IEP	Predicted GO
BP	GO:0046916	cellular transition metal ion homeostasis	IEP	Predicted GO
BP	GO:0048878	chemical homeostasis	IEP	Predicted GO
BP	GO:0050801	ion homeostasis	IEP	Predicted GO
BP	GO:0051187	cofactor catabolic process	IEP	Predicted GO
BP	GO:0055065	metal ion homeostasis	IEP	Predicted GO
BP	GO:0055072	iron ion homeostasis	IEP	Predicted GO
BP	GO:0055076	transition metal ion homeostasis	IEP	Predicted GO
BP	GO:0055080	cation homeostasis	IEP	Predicted GO
BP	GO:0055082	cellular chemical homeostasis	IEP	Predicted GO
BP	GO:0098771	inorganic ion homeostasis	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR003657	WRKY_dom	109	166

External Links

No external refs found!

Solyc08g062490

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation