Solyc08g062580

Description : Pentatricopeptide repeat-containing protein family (AHRD V3.3 *** A0A151SLA5_CAJCA)

Gene families : OG_42_0011071 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0011071_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Solanum release: Solyc08g062580
Cluster	HCCA clusters: Cluster_304

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0008270	zinc ion binding	IEA	InterProScan predictions
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0008131	primary amine oxidase activity	IEP	Predicted GO
MF	GO:0016641	oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR002885	Pentatricopeptide_repeat	240	286
IPR032867	DYW_dom	413	538
IPR002885	Pentatricopeptide_repeat	78	106
IPR002885	Pentatricopeptide_repeat	142	166
IPR002885	Pentatricopeptide_repeat	50	71
IPR002885	Pentatricopeptide_repeat	314	338
IPR002885	Pentatricopeptide_repeat	213	238
IPR002885	Pentatricopeptide_repeat	110	137

External Links

No external refs found!