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  5. Solyc08g062780

Solyc08g062780


Description : bHLH transcription factor 089


Gene families : OG_42_0005764 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0005764_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc08g062780

Target Alias Description ECC score Gene Family Method Actions
HORVU6Hr1G012730.1 No alias bHLH-type transcription factor & transcriptional... 0.04 Orthogroups_2024-Update
HORVU6Hr1G012760.1 No alias bHLH-type transcription factor & transcriptional... 0.04 Orthogroups_2024-Update
PSME_00030216-RA No alias (at5g65730 : 99.0) xyloglucan... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0001101 response to acid chemical IEP Predicted GO
MF GO:0005516 calmodulin binding IEP Predicted GO
BP GO:0009415 response to water IEP Predicted GO
CC GO:0009539 photosystem II reaction center IEP Predicted GO
BP GO:0009628 response to abiotic stimulus IEP Predicted GO
BP GO:0010035 response to inorganic substance IEP Predicted GO
BP GO:0010109 regulation of photosynthesis IEP Predicted GO
BP GO:0030001 metal ion transport IEP Predicted GO
BP GO:0042548 regulation of photosynthesis, light reaction IEP Predicted GO
BP GO:0042549 photosystem II stabilization IEP Predicted GO
BP GO:0043467 regulation of generation of precursor metabolites and energy IEP Predicted GO
BP GO:1901700 response to oxygen-containing compound IEP Predicted GO
InterPro domains Description Start Stop
IPR011598 bHLH_dom 335 379
IPR025610 MYC/MYB_N 6 153
No external refs found!