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  5. LOC_Os07g32420

LOC_Os07g32420


Description : bromodomain domain containing protein, expressed


Gene families : OG_42_0000275 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000275_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os07g32420
Cluster HCCA clusters: cluster_0050

Target Alias Description ECC score Gene Family Method Actions
At1g73150 No alias GTE3 [Source:UniProtKB/TrEMBL;Acc:A0A178W401] 0.02 Orthogroups_2024-Update
Bradi2g34827 No alias bromodomain and extraterminal domain protein 9 0.03 Orthogroups_2024-Update
Bradi3g14160 No alias bromodomain and extraterminal domain protein 9 0.03 Orthogroups_2024-Update
Brara.C00430.1 No alias transcriptional co-activator *(BET/GTE) 0.02 Orthogroups_2024-Update
Brara.C04410.1 No alias transcriptional co-activator *(BET/GTE) 0.02 Orthogroups_2024-Update
Brara.H02969.1 No alias transcriptional co-activator *(BET/GTE) 0.02 Orthogroups_2024-Update
Brara.I05417.1 No alias transcriptional co-activator *(BET/GTE) 0.02 Orthogroups_2024-Update
Glyma.15G154600 No alias Transcription factor GTE6 0.02 Orthogroups_2024-Update
Glyma.16G062200 No alias global transcription factor group E8 0.03 Orthogroups_2024-Update
HORVU3Hr1G015740.4 No alias Unknown function 0.02 Orthogroups_2024-Update
HORVU3Hr1G015760.6 No alias transcriptional co-activator *(BET/GTE) 0.04 Orthogroups_2024-Update
HORVU7Hr1G074620.7 No alias transcriptional co-activator *(BET/GTE) 0.06 Orthogroups_2024-Update
HORVU7Hr1G118300.1 No alias transcriptional co-activator *(BET/GTE) 0.07 Orthogroups_2024-Update
Potri.001G355300 No alias DNA-binding bromodomain-containing protein 0.02 Orthogroups_2024-Update
Seita.2G326000.1 No alias transcriptional co-activator *(BET/GTE) 0.03 Orthogroups_2024-Update
Seita.4G027300.1 No alias transcriptional co-activator *(BET/GTE) 0.04 Orthogroups_2024-Update
Seita.8G053600.1 No alias transcriptional co-activator *(BET/GTE) 0.02 Orthogroups_2024-Update
Sobic.005G059100.1 No alias transcriptional co-activator *(BET/GTE) 0.04 Orthogroups_2024-Update
evm.model.contig_2143.3 No alias no hits & (original description: no original description) 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP Predicted GO
MF GO:0004618 phosphoglycerate kinase activity IEP Predicted GO
MF GO:0004659 prenyltransferase activity IEP Predicted GO
MF GO:0004749 ribose phosphate diphosphokinase activity IEP Predicted GO
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP Predicted GO
BP GO:0006753 nucleoside phosphate metabolic process IEP Predicted GO
BP GO:0006886 intracellular protein transport IEP Predicted GO
BP GO:0008104 protein localization IEP Predicted GO
MF GO:0008318 protein prenyltransferase activity IEP Predicted GO
BP GO:0009056 catabolic process IEP Predicted GO
BP GO:0009057 macromolecule catabolic process IEP Predicted GO
BP GO:0009117 nucleotide metabolic process IEP Predicted GO
BP GO:0009165 nucleotide biosynthetic process IEP Predicted GO
BP GO:0015031 protein transport IEP Predicted GO
BP GO:0015833 peptide transport IEP Predicted GO
CC GO:0016459 myosin complex IEP Predicted GO
MF GO:0016774 phosphotransferase activity, carboxyl group as acceptor IEP Predicted GO
MF GO:0016778 diphosphotransferase activity IEP Predicted GO
BP GO:0017006 protein-tetrapyrrole linkage IEP Predicted GO
BP GO:0017007 protein-bilin linkage IEP Predicted GO
BP GO:0017009 protein-phycocyanobilin linkage IEP Predicted GO
BP GO:0018342 protein prenylation IEP Predicted GO
CC GO:0019773 proteasome core complex, alpha-subunit complex IEP Predicted GO
BP GO:0019941 modification-dependent protein catabolic process IEP Predicted GO
CC GO:0030126 COPI vesicle coat IEP Predicted GO
MF GO:0030145 manganese ion binding IEP Predicted GO
MF GO:0031072 heat shock protein binding IEP Predicted GO
BP GO:0033036 macromolecule localization IEP Predicted GO
BP GO:0042886 amide transport IEP Predicted GO
BP GO:0043632 modification-dependent macromolecule catabolic process IEP Predicted GO
BP GO:0044248 cellular catabolic process IEP Predicted GO
BP GO:0044265 cellular macromolecule catabolic process IEP Predicted GO
BP GO:0045184 establishment of protein localization IEP Predicted GO
BP GO:0046907 intracellular transport IEP Predicted GO
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEP Predicted GO
BP GO:0051641 cellular localization IEP Predicted GO
BP GO:0051649 establishment of localization in cell IEP Predicted GO
BP GO:0097354 prenylation IEP Predicted GO
BP GO:1901293 nucleoside phosphate biosynthetic process IEP Predicted GO
BP GO:1901575 organic substance catabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR001487 Bromodomain 66 149
No external refs found!