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  5. Solyc08g062920

Solyc08g062920


Description : elongation factor 2


Gene families : OG_42_0001704 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001704_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood Solanum release: Solyc08g062920
Cluster HCCA clusters: Cluster_102

Target Alias Description ECC score Gene Family Method Actions
Bradi3g44160 No alias Ribosomal protein S5/Elongation factor G/III/V family protein 0.1 Orthogroups_2024-Update
Bradi3g44175 No alias Ribosomal protein S5/Elongation factor G/III/V family protein 0.1 Orthogroups_2024-Update
Brara.B03590.1 No alias mRNA-translocation factor *(eEF2)) 0.04 Orthogroups_2024-Update
Brara.D02178.1 No alias mRNA-translocation factor *(eEF2)) 0.14 Orthogroups_2024-Update
Brara.H01897.1 No alias mRNA-translocation factor *(eEF2)) 0.08 Orthogroups_2024-Update
Brara.H01898.1 No alias mRNA-translocation factor *(eEF2)) 0.18 Orthogroups_2024-Update
HORVU5Hr1G116710.5 No alias mRNA-translocation factor *(eEF2)) 0.04 Orthogroups_2024-Update
HORVU7Hr1G106150.2 No alias mRNA-translocation factor *(eEF2)) 0.09 Orthogroups_2024-Update
Kfl00080_0090 kfl00080_0090_v1.1 (at1g56070 : 1415.0) encodes a translation elongation... 0.02 Orthogroups_2024-Update
Mp2g20190.1 No alias mRNA-translocation factor (eEF2) 0.04 Orthogroups_2024-Update
Mp2g20200.1 No alias mRNA-translocation factor (eEF2) 0.04 Orthogroups_2024-Update
Sobic.001G021300.1 No alias mRNA-translocation factor *(eEF2)) 0.26 Orthogroups_2024-Update
Sobic.001G021400.1 No alias mRNA-translocation factor *(eEF2)) 0.24 Orthogroups_2024-Update
Sopen08g018430 No alias Elongation factor Tu GTP binding domain 0.11 Orthogroups_2024-Update
evm.model.contig_2314.1 No alias (o23755|ef2_betvu : 1094.0) Elongation factor 2 (EF-2) -... 0.17 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005525 GTP binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Predicted GO
MF GO:0003723 RNA binding IEP Predicted GO
MF GO:0003735 structural constituent of ribosome IEP Predicted GO
MF GO:0003746 translation elongation factor activity IEP Predicted GO
MF GO:0005198 structural molecule activity IEP Predicted GO
CC GO:0005575 cellular_component IEP Predicted GO
CC GO:0005622 intracellular IEP Predicted GO
CC GO:0005840 ribosome IEP Predicted GO
BP GO:0006412 translation IEP Predicted GO
BP GO:0006414 translational elongation IEP Predicted GO
BP GO:0006518 peptide metabolic process IEP Predicted GO
BP GO:0006807 nitrogen compound metabolic process IEP Predicted GO
MF GO:0008097 5S rRNA binding IEP Predicted GO
MF GO:0008135 translation factor activity, RNA binding IEP Predicted GO
BP GO:0008150 biological_process IEP Predicted GO
BP GO:0008152 metabolic process IEP Predicted GO
BP GO:0009058 biosynthetic process IEP Predicted GO
BP GO:0009059 macromolecule biosynthetic process IEP Predicted GO
BP GO:0009987 cellular process IEP Predicted GO
CC GO:0015934 large ribosomal subunit IEP Predicted GO
BP GO:0019538 protein metabolic process IEP Predicted GO
MF GO:0019843 rRNA binding IEP Predicted GO
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Predicted GO
CC GO:0032991 protein-containing complex IEP Predicted GO
BP GO:0034641 cellular nitrogen compound metabolic process IEP Predicted GO
BP GO:0034645 cellular macromolecule biosynthetic process IEP Predicted GO
BP GO:0042254 ribosome biogenesis IEP Predicted GO
BP GO:0043043 peptide biosynthetic process IEP Predicted GO
BP GO:0043170 macromolecule metabolic process IEP Predicted GO
CC GO:0043226 organelle IEP Predicted GO
CC GO:0043228 non-membrane-bounded organelle IEP Predicted GO
CC GO:0043229 intracellular organelle IEP Predicted GO
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Predicted GO
BP GO:0043603 cellular amide metabolic process IEP Predicted GO
BP GO:0043604 amide biosynthetic process IEP Predicted GO
BP GO:0044085 cellular component biogenesis IEP Predicted GO
BP GO:0044237 cellular metabolic process IEP Predicted GO
BP GO:0044238 primary metabolic process IEP Predicted GO
BP GO:0044249 cellular biosynthetic process IEP Predicted GO
BP GO:0044260 cellular macromolecule metabolic process IEP Predicted GO
BP GO:0044267 cellular protein metabolic process IEP Predicted GO
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Predicted GO
CC GO:0044391 ribosomal subunit IEP Predicted GO
CC GO:0044424 intracellular part IEP Predicted GO
CC GO:0044444 cytoplasmic part IEP Predicted GO
CC GO:0044464 cell part IEP Predicted GO
BP GO:0071704 organic substance metabolic process IEP Predicted GO
BP GO:1901564 organonitrogen compound metabolic process IEP Predicted GO
BP GO:1901566 organonitrogen compound biosynthetic process IEP Predicted GO
BP GO:1901576 organic substance biosynthetic process IEP Predicted GO
CC GO:1990904 ribonucleoprotein complex IEP Predicted GO
InterPro domains Description Start Stop
IPR005517 Transl_elong_EFG/EF2_IV 610 722
IPR009022 EFG_III 487 549
IPR004161 EFTu-like_2 393 468
IPR000640 EFG_V-like 724 811
No external refs found!