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  5. LOC_Os07g35940

LOC_Os07g35940


Description : beta-amylase, putative, expressed


Gene families : OG_42_0000277 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000277_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os07g35940
Cluster HCCA clusters: cluster_0040

Target Alias Description ECC score Gene Family Method Actions
Bradi1g75610 No alias beta-amylase 1 0.03 Orthogroups_2024-Update
Bradi3g33730 No alias chloroplast beta-amylase 0.02 Orthogroups_2024-Update
Brara.G00610.1 No alias EC_3.2 glycosylase & beta amylase 0.02 Orthogroups_2024-Update
Brara.H00800.1 No alias EC_3.2 glycosylase & beta amylase 0.03 Orthogroups_2024-Update
Glyma.15G098100 No alias beta-amylase 3 0.02 Orthogroups_2024-Update
HORVU4Hr1G089510.3 No alias EC_3.2 glycosylase & beta amylase 0.02 Orthogroups_2024-Update
MA_10432035g0010 No alias (at3g23920 : 650.0) Encodes a chloroplast beta-amylase.... 0.02 Orthogroups_2024-Update
PSME_00007156-RA No alias (p10538|amyb_soybn : 599.0) Beta-amylase (EC 3.2.1.2)... 0.02 Orthogroups_2024-Update
PSME_00015760-RA No alias (at3g23920 : 407.0) Encodes a chloroplast beta-amylase.... 0.03 Orthogroups_2024-Update
PSME_00049129-RA No alias (at3g23920 : 726.0) Encodes a chloroplast beta-amylase.... 0.02 Orthogroups_2024-Update
Pp1s121_168V6 No alias beta- 0.02 Orthogroups_2024-Update
Seita.9G544600.1 No alias beta amylase & EC_3.2 glycosylase 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0000272 polysaccharide catabolic process IEA InterProScan predictions
MF GO:0016161 beta-amylase activity IEA InterProScan predictions
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Type GO Term Name Evidence Source
CC GO:0000814 ESCRT II complex IEP Predicted GO
BP GO:0002682 regulation of immune system process IEP Predicted GO
BP GO:0002831 regulation of response to biotic stimulus IEP Predicted GO
MF GO:0005506 iron ion binding IEP Predicted GO
BP GO:0005991 trehalose metabolic process IEP Predicted GO
BP GO:0005992 trehalose biosynthetic process IEP Predicted GO
BP GO:0006790 sulfur compound metabolic process IEP Predicted GO
MF GO:0008146 sulfotransferase activity IEP Predicted GO
BP GO:0009312 oligosaccharide biosynthetic process IEP Predicted GO
BP GO:0010112 regulation of systemic acquired resistance IEP Predicted GO
BP GO:0016226 iron-sulfur cluster assembly IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP Predicted GO
MF GO:0016636 oxidoreductase activity, acting on the CH-CH group of donors, iron-sulfur protein as acceptor IEP Predicted GO
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Predicted GO
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Predicted GO
MF GO:0016782 transferase activity, transferring sulfur-containing groups IEP Predicted GO
MF GO:0016840 carbon-nitrogen lyase activity IEP Predicted GO
MF GO:0016843 amine-lyase activity IEP Predicted GO
MF GO:0016844 strictosidine synthase activity IEP Predicted GO
MF GO:0019842 vitamin binding IEP Predicted GO
MF GO:0030976 thiamine pyrophosphate binding IEP Predicted GO
BP GO:0031163 metallo-sulfur cluster assembly IEP Predicted GO
BP GO:0031347 regulation of defense response IEP Predicted GO
BP GO:0032101 regulation of response to external stimulus IEP Predicted GO
CC GO:0036452 ESCRT complex IEP Predicted GO
BP GO:0043900 regulation of multi-organism process IEP Predicted GO
CC GO:0044433 cytoplasmic vesicle part IEP Predicted GO
CC GO:0044440 endosomal part IEP Predicted GO
BP GO:0045088 regulation of innate immune response IEP Predicted GO
BP GO:0046351 disaccharide biosynthetic process IEP Predicted GO
MF GO:0048037 cofactor binding IEP Predicted GO
BP GO:0048583 regulation of response to stimulus IEP Predicted GO
MF GO:0050662 coenzyme binding IEP Predicted GO
BP GO:0050776 regulation of immune response IEP Predicted GO
MF GO:0051743 red chlorophyll catabolite reductase activity IEP Predicted GO
MF GO:0051920 peroxiredoxin activity IEP Predicted GO
BP GO:0071985 multivesicular body sorting pathway IEP Predicted GO
BP GO:0080134 regulation of response to stress IEP Predicted GO
MF GO:1901681 sulfur compound binding IEP Predicted GO
InterPro domains Description Start Stop
IPR001554 Glyco_hydro_14 14 435
No external refs found!