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  5. LOC_Os07g37240

LOC_Os07g37240


Description : chlorophyll A-B binding protein, putative, expressed


Gene families : OG_42_0004123 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0004123_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os07g37240
Cluster HCCA clusters: cluster_0010

Target Alias Description ECC score Gene Family Method Actions
At3g08940 No alias Chlorophyll a-b binding protein CP29.2, chloroplastic... 0.03 Orthogroups_2024-Update
Bradi1g24870 No alias light harvesting complex photosystem II 0.05 Orthogroups_2024-Update
Brara.B00018.1 No alias component *(LHCb4) of LHC-II complex 0.02 Orthogroups_2024-Update
Brara.E03123.1 No alias component *(LHCb4) of LHC-II complex 0.06 Orthogroups_2024-Update
Cre17.g720250 No alias light harvesting complex photosystem II 0.04 Orthogroups_2024-Update
Glyma.01G115900 No alias light harvesting complex photosystem II 0.05 Orthogroups_2024-Update
Glyma.03G060300 No alias light harvesting complex photosystem II 0.05 Orthogroups_2024-Update
Glyma.11G228800 No alias light harvesting complex photosystem II 0.03 Orthogroups_2024-Update
HORVU2Hr1G041270.2 No alias Unknown function 0.06 Orthogroups_2024-Update
HORVU2Hr1G041280.1 No alias Unknown function 0.06 Orthogroups_2024-Update
Kfl00258_0020 kfl00258_0020_v1.1 (at5g01530 : 324.0) light harvesting complex photosystem... 0.06 Orthogroups_2024-Update
MA_129206g0010 No alias (at2g40100 : 288.0) Lhcb4:3 protein (Lhcb4.3, light... 0.04 Orthogroups_2024-Update
Mp1g16850.1 No alias component LHCb4 of LHC-II complex 0.05 Orthogroups_2024-Update
Potri.006G099500 No alias light harvesting complex photosystem II 0.04 Orthogroups_2024-Update
Pp1s155_34V6 No alias chlorophyll a b binding 0.02 Orthogroups_2024-Update
Pp1s472_15V6 No alias chlorophyll a b binding 0.03 Orthogroups_2024-Update
Sobic.002G338000.1 No alias component *(LHCb4) of LHC-II complex 0.07 Orthogroups_2024-Update
Solyc09g014520 No alias Chlorophyll a-b binding protein, chloroplastic (AHRD... 0.08 Orthogroups_2024-Update
Sopen09g007360 No alias Chlorophyll A-B binding protein 0.05 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000774 adenyl-nucleotide exchange factor activity IEP Predicted GO
MF GO:0003839 gamma-glutamylcyclotransferase activity IEP Predicted GO
MF GO:0004066 asparagine synthase (glutamine-hydrolyzing) activity IEP Predicted GO
MF GO:0004222 metalloendopeptidase activity IEP Predicted GO
MF GO:0004427 inorganic diphosphatase activity IEP Predicted GO
BP GO:0006528 asparagine metabolic process IEP Predicted GO
BP GO:0006529 asparagine biosynthetic process IEP Predicted GO
BP GO:0006575 cellular modified amino acid metabolic process IEP Predicted GO
BP GO:0006749 glutathione metabolic process IEP Predicted GO
BP GO:0006751 glutathione catabolic process IEP Predicted GO
BP GO:0006790 sulfur compound metabolic process IEP Predicted GO
MF GO:0008237 metallopeptidase activity IEP Predicted GO
BP GO:0009066 aspartate family amino acid metabolic process IEP Predicted GO
BP GO:0009067 aspartate family amino acid biosynthetic process IEP Predicted GO
BP GO:0009143 nucleoside triphosphate catabolic process IEP Predicted GO
CC GO:0009521 photosystem IEP Predicted GO
CC GO:0009522 photosystem I IEP Predicted GO
MF GO:0009678 hydrogen-translocating pyrophosphatase activity IEP Predicted GO
BP GO:0015979 photosynthesis IEP Predicted GO
BP GO:0016226 iron-sulfur cluster assembly IEP Predicted GO
MF GO:0016462 pyrophosphatase activity IEP Predicted GO
MF GO:0016624 oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor IEP Predicted GO
MF GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor IEP Predicted GO
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Predicted GO
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Predicted GO
MF GO:0016842 amidine-lyase activity IEP Predicted GO
MF GO:0016853 isomerase activity IEP Predicted GO
MF GO:0016872 intramolecular lyase activity IEP Predicted GO
MF GO:0016884 carbon-nitrogen ligase activity, with glutamine as amido-N-donor IEP Predicted GO
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP Predicted GO
BP GO:0019725 cellular homeostasis IEP Predicted GO
BP GO:0031163 metallo-sulfur cluster assembly IEP Predicted GO
MF GO:0033743 peptide-methionine (R)-S-oxide reductase activity IEP Predicted GO
BP GO:0042219 cellular modified amino acid catabolic process IEP Predicted GO
BP GO:0042592 homeostatic process IEP Predicted GO
MF GO:0042802 identical protein binding IEP Predicted GO
MF GO:0042803 protein homodimerization activity IEP Predicted GO
BP GO:0043171 peptide catabolic process IEP Predicted GO
BP GO:0044273 sulfur compound catabolic process IEP Predicted GO
CC GO:0044425 membrane part IEP Predicted GO
CC GO:0044436 thylakoid part IEP Predicted GO
BP GO:0045454 cell redox homeostasis IEP Predicted GO
MF GO:0047429 nucleoside-triphosphate diphosphatase activity IEP Predicted GO
MF GO:0051087 chaperone binding IEP Predicted GO
BP GO:0051186 cofactor metabolic process IEP Predicted GO
BP GO:0051187 cofactor catabolic process IEP Predicted GO
MF GO:0060590 ATPase regulator activity IEP Predicted GO
BP GO:0065008 regulation of biological quality IEP Predicted GO
CC GO:0098796 membrane protein complex IEP Predicted GO
InterPro domains Description Start Stop
IPR022796 Chloroa_b-bind 63 259
No external refs found!