LOC_Os07g39480

Description : WRKY87, expressed

Gene families : OG_42_0000005 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Oryza release: LOC_Os07g39480
Cluster	HCCA clusters: cluster_0107

Target	Alias	Description	ECC score	Gene Family Method
A4A49_05413	No alias	putative wrky transcription factor 2	0.04	Orthogroups_2024-Update
A4A49_19262	No alias	putative wrky transcription factor 40	0.02	Orthogroups_2024-Update
At1g13960	No alias	Probable WRKY transcription factor 4...	0.03	Orthogroups_2024-Update
At5g46350	No alias	Probable WRKY transcription factor 8...	0.02	Orthogroups_2024-Update
Bradi1g01058	No alias	WRKY DNA-binding protein 35	0.03	Orthogroups_2024-Update
Bradi1g47690	No alias	WRKY family transcription factor family protein	0.02	Orthogroups_2024-Update
Bradi4g06690	No alias	WRKY DNA-binding protein 4	0.02	Orthogroups_2024-Update
Brara.A00597.1	No alias	WRKY-type transcription factor	0.02	Orthogroups_2024-Update
Brara.B00978.1	No alias	WRKY-type transcription factor	0.03	Orthogroups_2024-Update
Brara.B03911.1	No alias	WRKY-type transcription factor	0.02	Orthogroups_2024-Update
Brara.F00929.1	No alias	WRKY-type transcription factor	0.02	Orthogroups_2024-Update
Brara.G02484.1	No alias	WRKY-type transcription factor	0.02	Orthogroups_2024-Update
Brara.H01547.1	No alias	WRKY-type transcription factor	0.02	Orthogroups_2024-Update
Brara.J01061.1	No alias	WRKY-type transcription factor	0.02	Orthogroups_2024-Update
GRMZM2G005207	No alias	WRKY DNA-binding protein 70	0.02	Orthogroups_2024-Update
GRMZM2G060918	No alias	WRKY family transcription factor	0.03	Orthogroups_2024-Update
GRMZM2G163054	No alias	WRKY DNA-binding protein 50	0.02	Orthogroups_2024-Update
Glyma.01G043300	No alias	WRKY DNA-binding protein 72	0.03	Orthogroups_2024-Update
Glyma.14G006800	No alias	zinc-dependent activator protein-1	0.03	Orthogroups_2024-Update
Glyma.14G016200	No alias	WRKY family transcription factor family protein	0.02	Orthogroups_2024-Update
HORVU3Hr1G071750.1	No alias	WRKY-type transcription factor	0.03	Orthogroups_2024-Update
MA_16118g0010	No alias	(at5g56270 : 324.0) WRKY transcription factor 2; WRKY...	0.03	Orthogroups_2024-Update
PSME_00010621-RA	No alias	(at4g26640 : 197.0) member of WRKY Transcription Factor;...	0.02	Orthogroups_2024-Update
PSME_00033470-RA	No alias	(at4g18170 : 153.0) member of WRKY Transcription Factor;...	0.02	Orthogroups_2024-Update
Potri.001G092900	No alias	WRKY family transcription factor	0.02	Orthogroups_2024-Update
Potri.003G138600	No alias	WRKY family transcription factor	0.02	Orthogroups_2024-Update
Potri.005G086400	No alias	WRKY DNA-binding protein 13	0.03	Orthogroups_2024-Update
Potri.014G050000	No alias	WRKY family transcription factor	0.03	Orthogroups_2024-Update
Potri.015G064100	No alias	WRKY DNA-binding protein 72	0.02	Orthogroups_2024-Update
Potri.016G128300	No alias	WRKY DNA-binding protein 33	0.02	Orthogroups_2024-Update
Seita.2G248500.1	No alias	WRKY-type transcription factor	0.03	Orthogroups_2024-Update
Sobic.001G332500.1	No alias	WRKY-type transcription factor	0.02	Orthogroups_2024-Update
Sobic.007G217700.3	No alias	WRKY-type transcription factor	0.03	Orthogroups_2024-Update
Solyc07g056280	No alias	WRKY transcription factor 30	0.02	Orthogroups_2024-Update
Sopen01g047060	No alias	WRKY DNA -binding domain	0.02	Orthogroups_2024-Update
Sopen10g005700	No alias	WRKY DNA -binding domain	0.02	Orthogroups_2024-Update
Sopen10g033820	No alias	WRKY DNA -binding domain	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	InterProScan predictions
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	InterProScan predictions
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
MF	GO:0043565	sequence-specific DNA binding	IEA	InterProScan predictions
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
BP	GO:0000413	protein peptidyl-prolyl isomerization	IEP	Predicted GO
MF	GO:0003755	peptidyl-prolyl cis-trans isomerase activity	IEP	Predicted GO
MF	GO:0003779	actin binding	IEP	Predicted GO
MF	GO:0004363	glutathione synthase activity	IEP	Predicted GO
MF	GO:0005515	protein binding	IEP	Predicted GO
BP	GO:0006575	cellular modified amino acid metabolic process	IEP	Predicted GO
BP	GO:0006749	glutathione metabolic process	IEP	Predicted GO
BP	GO:0006750	glutathione biosynthetic process	IEP	Predicted GO
BP	GO:0008104	protein localization	IEP	Predicted GO
BP	GO:0015031	protein transport	IEP	Predicted GO
BP	GO:0015833	peptide transport	IEP	Predicted GO
BP	GO:0016197	endosomal transport	IEP	Predicted GO
BP	GO:0016482	cytosolic transport	IEP	Predicted GO
MF	GO:0016859	cis-trans isomerase activity	IEP	Predicted GO
MF	GO:0016881	acid-amino acid ligase activity	IEP	Predicted GO
BP	GO:0018208	peptidyl-proline modification	IEP	Predicted GO
BP	GO:0019184	nonribosomal peptide biosynthetic process	IEP	Predicted GO
CC	GO:0030906	retromer, cargo-selective complex	IEP	Predicted GO
BP	GO:0033036	macromolecule localization	IEP	Predicted GO
BP	GO:0042147	retrograde transport, endosome to Golgi	IEP	Predicted GO
BP	GO:0042398	cellular modified amino acid biosynthetic process	IEP	Predicted GO
BP	GO:0042886	amide transport	IEP	Predicted GO
BP	GO:0044272	sulfur compound biosynthetic process	IEP	Predicted GO
BP	GO:0045184	establishment of protein localization	IEP	Predicted GO
BP	GO:0046907	intracellular transport	IEP	Predicted GO
BP	GO:0051641	cellular localization	IEP	Predicted GO
BP	GO:0051649	establishment of localization in cell	IEP	Predicted GO
BP	GO:0071702	organic substance transport	IEP	Predicted GO
BP	GO:0071705	nitrogen compound transport	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR003657	WRKY_dom	236	292
IPR003657	WRKY_dom	410	467

External Links

No external refs found!

LOC_Os07g39480

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation