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  5. LOC_Os07g40810

LOC_Os07g40810


Description : NBS-LRR type disease resistance protein, putative, expressed


Gene families : OG_42_0000064 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000064_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os07g40810
Cluster HCCA clusters: cluster_0085

Target Alias Description ECC score Gene Family Method Actions
Bradi1g01374 No alias NB-ARC domain-containing disease resistance protein 0.02 Orthogroups_2024-Update
Bradi1g48747 No alias NB-ARC domain-containing disease resistance protein 0.02 Orthogroups_2024-Update
Bradi3g15593 No alias NB-ARC domain-containing disease resistance protein 0.03 Orthogroups_2024-Update
Bradi4g01687 No alias NB-ARC domain-containing disease resistance protein 0.02 Orthogroups_2024-Update
HORVU2Hr1G033950.1 No alias Unknown function 0.02 Orthogroups_2024-Update
HORVU7Hr1G121190.2 No alias Unknown function 0.02 Orthogroups_2024-Update
LOC_Os08g29854 No alias RGH1A, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os11g16530 No alias mal, putative, expressed 0.04 Orthogroups_2024-Update
Seita.8G101600.1 No alias Unknown function 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0043531 ADP binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0005516 calmodulin binding IEP Predicted GO
BP GO:0006352 DNA-templated transcription, initiation IEP Predicted GO
BP GO:0006890 retrograde vesicle-mediated transport, Golgi to ER IEP Predicted GO
BP GO:0009059 macromolecule biosynthetic process IEP Predicted GO
CC GO:0009523 photosystem II IEP Predicted GO
CC GO:0009654 photosystem II oxygen evolving complex IEP Predicted GO
MF GO:0016597 amino acid binding IEP Predicted GO
MF GO:0016743 carboxyl- or carbamoyltransferase activity IEP Predicted GO
BP GO:0018130 heterocycle biosynthetic process IEP Predicted GO
BP GO:0019438 aromatic compound biosynthetic process IEP Predicted GO
CC GO:0019898 extrinsic component of membrane IEP Predicted GO
CC GO:0030684 preribosome IEP Predicted GO
CC GO:0030880 RNA polymerase complex IEP Predicted GO
MF GO:0031406 carboxylic acid binding IEP Predicted GO
CC GO:0032040 small-subunit processome IEP Predicted GO
BP GO:0032774 RNA biosynthetic process IEP Predicted GO
CC GO:0032991 protein-containing complex IEP Predicted GO
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP Predicted GO
MF GO:0043177 organic acid binding IEP Predicted GO
MF GO:0043565 sequence-specific DNA binding IEP Predicted GO
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Predicted GO
BP GO:0048193 Golgi vesicle transport IEP Predicted GO
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP Predicted GO
BP GO:1901362 organic cyclic compound biosynthetic process IEP Predicted GO
CC GO:1902494 catalytic complex IEP Predicted GO
CC GO:1990204 oxidoreductase complex IEP Predicted GO
CC GO:1990234 transferase complex IEP Predicted GO
CC GO:1990904 ribonucleoprotein complex IEP Predicted GO
InterPro domains Description Start Stop
IPR002182 NB-ARC 191 452
No external refs found!