1. Home
  2. Species
  3. Oryza sativa
  4. Sequence
  5. LOC_Os07g41580

LOC_Os07g41580


Description : histone-like transcription factor and archaeal histone, putative, expressed


Gene families : OG_42_0000232 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000232_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os07g41580
Cluster HCCA clusters: cluster_0103

Target Alias Description ECC score Gene Family Method Actions
A4A49_02359 No alias nuclear transcription factor y subunit b-3 0.02 Orthogroups_2024-Update
At2g47810 No alias NF-YB5 [Source:UniProtKB/TrEMBL;Acc:A0A178VUG0] 0.02 Orthogroups_2024-Update
At4g14540 No alias Nuclear transcription factor Y subunit B-3... 0.03 Orthogroups_2024-Update
Brara.A03094.1 No alias component *(NF-YB) of NF-Y transcription factor complex 0.02 Orthogroups_2024-Update
Brara.C03591.1 No alias component *(NF-YB) of NF-Y transcription factor complex 0.03 Orthogroups_2024-Update
Brara.E02549.1 No alias component *(NF-YB) of NF-Y transcription factor complex 0.04 Orthogroups_2024-Update
Kfl00283_0190 kfl00283_0190_v1.1 "(p25209|nfyb_maize : 195.0) Nuclear transcription... 0.01 Orthogroups_2024-Update
Potri.016G006100 No alias nuclear factor Y, subunit B3 0.03 Orthogroups_2024-Update
Sobic.002G369800.1 No alias component *(NF-YB) of NF-Y transcription factor complex 0.03 Orthogroups_2024-Update
Solyc07g065500 No alias CCAAT-binding transcription factor 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000814 ESCRT II complex IEP Predicted GO
MF GO:0003905 alkylbase DNA N-glycosylase activity IEP Predicted GO
MF GO:0003954 NADH dehydrogenase activity IEP Predicted GO
CC GO:0005739 mitochondrion IEP Predicted GO
BP GO:0006284 base-excision repair IEP Predicted GO
BP GO:0006810 transport IEP Predicted GO
BP GO:0006835 dicarboxylic acid transport IEP Predicted GO
MF GO:0008137 NADH dehydrogenase (ubiquinone) activity IEP Predicted GO
MF GO:0008725 DNA-3-methyladenine glycosylase activity IEP Predicted GO
MF GO:0009496 plastoquinol--plastocyanin reductase activity IEP Predicted GO
BP GO:0015711 organic anion transport IEP Predicted GO
BP GO:0015740 C4-dicarboxylate transport IEP Predicted GO
BP GO:0015743 malate transport IEP Predicted GO
BP GO:0015849 organic acid transport IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor IEP Predicted GO
MF GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor IEP Predicted GO
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP Predicted GO
MF GO:0019104 DNA N-glycosylase activity IEP Predicted GO
MF GO:0020037 heme binding IEP Predicted GO
MF GO:0033743 peptide-methionine (R)-S-oxide reductase activity IEP Predicted GO
CC GO:0034357 photosynthetic membrane IEP Predicted GO
CC GO:0036452 ESCRT complex IEP Predicted GO
CC GO:0042651 thylakoid membrane IEP Predicted GO
MF GO:0043733 DNA-3-methylbase glycosylase activity IEP Predicted GO
CC GO:0044440 endosomal part IEP Predicted GO
MF GO:0046906 tetrapyrrole binding IEP Predicted GO
BP GO:0046942 carboxylic acid transport IEP Predicted GO
MF GO:0050136 NADH dehydrogenase (quinone) activity IEP Predicted GO
BP GO:0051179 localization IEP Predicted GO
BP GO:0051234 establishment of localization IEP Predicted GO
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP Predicted GO
MF GO:0052880 oxidoreductase activity, acting on diphenols and related substances as donors, with copper protein as acceptor IEP Predicted GO
BP GO:0055085 transmembrane transport IEP Predicted GO
BP GO:0071985 multivesicular body sorting pathway IEP Predicted GO
InterPro domains Description Start Stop
IPR003958 CBFA_NFYB_domain 26 90
No external refs found!