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  5. LOC_Os07g42220

LOC_Os07g42220


Description : expressed protein


Gene families : OG_42_0000341 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000341_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os07g42220
Cluster HCCA clusters: cluster_0048

Target Alias Description ECC score Gene Family Method Actions
A4A49_16697 No alias hypothetical protein 0.03 Orthogroups_2024-Update
Bradi2g06140 No alias Protein of unknown function (DUF1677) 0.02 Orthogroups_2024-Update
Brara.F02764.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Glyma.04G085300 No alias Protein of unknown function (DUF1677) 0.02 Orthogroups_2024-Update
Pp1s389_8V6 No alias hypothetical protein [Oryza sativa (japonica cultivar-group)] 0.02 Orthogroups_2024-Update
Seita.9G094700.1 No alias Unknown function 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Predicted GO
MF GO:0043565 sequence-specific DNA binding IEP Predicted GO
MF GO:0140110 transcription regulator activity IEP Predicted GO
InterPro domains Description Start Stop
IPR012876 DUF1677_pln 15 105
No external refs found!