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  5. LOC_Os07g42500

LOC_Os07g42500


Description : FYVE zinc finger domain containing protein, expressed


Gene families : OG_42_0001621 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001621_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os07g42500
Cluster HCCA clusters: cluster_0088


Type GO Term Name Evidence Source
MF GO:0046872 metal ion binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP Predicted GO
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Predicted GO
BP GO:0000398 mRNA splicing, via spliceosome IEP Predicted GO
CC GO:0000814 ESCRT II complex IEP Predicted GO
MF GO:0003997 acyl-CoA oxidase activity IEP Predicted GO
MF GO:0005506 iron ion binding IEP Predicted GO
CC GO:0005575 cellular_component IEP Predicted GO
CC GO:0005743 mitochondrial inner membrane IEP Predicted GO
CC GO:0005777 peroxisome IEP Predicted GO
BP GO:0006397 mRNA processing IEP Predicted GO
BP GO:0006635 fatty acid beta-oxidation IEP Predicted GO
BP GO:0006839 mitochondrial transport IEP Predicted GO
BP GO:0006848 pyruvate transport IEP Predicted GO
BP GO:0006850 mitochondrial pyruvate transmembrane transport IEP Predicted GO
BP GO:0008380 RNA splicing IEP Predicted GO
BP GO:0009056 catabolic process IEP Predicted GO
BP GO:0009062 fatty acid catabolic process IEP Predicted GO
BP GO:0015711 organic anion transport IEP Predicted GO
BP GO:0015718 monocarboxylic acid transport IEP Predicted GO
BP GO:0015849 organic acid transport IEP Predicted GO
BP GO:0016042 lipid catabolic process IEP Predicted GO
BP GO:0016054 organic acid catabolic process IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP Predicted GO
MF GO:0016634 oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor IEP Predicted GO
MF GO:0016636 oxidoreductase activity, acting on the CH-CH group of donors, iron-sulfur protein as acceptor IEP Predicted GO
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Predicted GO
MF GO:0016840 carbon-nitrogen lyase activity IEP Predicted GO
MF GO:0016843 amine-lyase activity IEP Predicted GO
MF GO:0016844 strictosidine synthase activity IEP Predicted GO
BP GO:0019395 fatty acid oxidation IEP Predicted GO
CC GO:0019866 organelle inner membrane IEP Predicted GO
MF GO:0020037 heme binding IEP Predicted GO
BP GO:0030258 lipid modification IEP Predicted GO
CC GO:0030532 small nuclear ribonucleoprotein complex IEP Predicted GO
CC GO:0031090 organelle membrane IEP Predicted GO
CC GO:0031966 mitochondrial membrane IEP Predicted GO
BP GO:0034440 lipid oxidation IEP Predicted GO
CC GO:0036452 ESCRT complex IEP Predicted GO
CC GO:0042579 microbody IEP Predicted GO
BP GO:0044242 cellular lipid catabolic process IEP Predicted GO
BP GO:0044282 small molecule catabolic process IEP Predicted GO
CC GO:0044422 organelle part IEP Predicted GO
CC GO:0044424 intracellular part IEP Predicted GO
CC GO:0044433 cytoplasmic vesicle part IEP Predicted GO
CC GO:0044440 endosomal part IEP Predicted GO
CC GO:0044444 cytoplasmic part IEP Predicted GO
CC GO:0044446 intracellular organelle part IEP Predicted GO
CC GO:0044464 cell part IEP Predicted GO
BP GO:0046395 carboxylic acid catabolic process IEP Predicted GO
CC GO:0046540 U4/U6 x U5 tri-snRNP complex IEP Predicted GO
MF GO:0046906 tetrapyrrole binding IEP Predicted GO
BP GO:0046942 carboxylic acid transport IEP Predicted GO
MF GO:0048037 cofactor binding IEP Predicted GO
MF GO:0051743 red chlorophyll catabolite reductase activity IEP Predicted GO
BP GO:0055114 oxidation-reduction process IEP Predicted GO
BP GO:0071985 multivesicular body sorting pathway IEP Predicted GO
BP GO:0072329 monocarboxylic acid catabolic process IEP Predicted GO
CC GO:0097525 spliceosomal snRNP complex IEP Predicted GO
CC GO:0097526 spliceosomal tri-snRNP complex IEP Predicted GO
BP GO:0098656 anion transmembrane transport IEP Predicted GO
CC GO:0120114 Sm-like protein family complex IEP Predicted GO
BP GO:1901475 pyruvate transmembrane transport IEP Predicted GO
BP GO:1901575 organic substance catabolic process IEP Predicted GO
BP GO:1903825 organic acid transmembrane transport IEP Predicted GO
BP GO:1905039 carboxylic acid transmembrane transport IEP Predicted GO
BP GO:1990542 mitochondrial transmembrane transport IEP Predicted GO
InterPro domains Description Start Stop
IPR007461 Ysc84_actin-binding 330 455
IPR000306 Znf_FYVE 148 213
No external refs found!