1. Home
  2. Species
  3. Oryza sativa
  4. Sequence
  5. LOC_Os07g43890

LOC_Os07g43890


Description : emp24/gp25L/p24 family protein, putative, expressed


Gene families : OG_42_0000545 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000545_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os07g43890
Cluster HCCA clusters: cluster_0051

Target Alias Description ECC score Gene Family Method Actions
GRMZM2G134497 No alias emp24/gp25L/p24 family/GOLD family protein 0.03 Orthogroups_2024-Update
Seita.2G226600.1 No alias component *(p24-delta) of GPI-anchor protein cargo... 0.02 Orthogroups_2024-Update
Sopen10g016010 No alias emp24/gp25L/p24 family/GOLD 0.03 Orthogroups_2024-Update
evm.model.tig00000821.8 No alias (at1g21900 : 129.0) emp24/gp25L/p24 family/GOLD family... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003684 damaged DNA binding IEP Predicted GO
MF GO:0003885 D-arabinono-1,4-lactone oxidase activity IEP Predicted GO
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Predicted GO
CC GO:0005575 cellular_component IEP Predicted GO
CC GO:0005618 cell wall IEP Predicted GO
BP GO:0005975 carbohydrate metabolic process IEP Predicted GO
BP GO:0006289 nucleotide-excision repair IEP Predicted GO
MF GO:0008168 methyltransferase activity IEP Predicted GO
BP GO:0010215 cellulose microfibril organization IEP Predicted GO
BP GO:0010498 proteasomal protein catabolic process IEP Predicted GO
BP GO:0016049 cell growth IEP Predicted GO
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Predicted GO
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Predicted GO
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Predicted GO
MF GO:0016899 oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor IEP Predicted GO
BP GO:0030163 protein catabolic process IEP Predicted GO
BP GO:0030198 extracellular matrix organization IEP Predicted GO
CC GO:0030312 external encapsulating structure IEP Predicted GO
CC GO:0031225 anchored component of membrane IEP Predicted GO
BP GO:0040007 growth IEP Predicted GO
BP GO:0043062 extracellular structure organization IEP Predicted GO
BP GO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process IEP Predicted GO
CC GO:0048046 apoplast IEP Predicted GO
BP GO:1901565 organonitrogen compound catabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR009038 GOLD_dom 37 225
No external refs found!