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  5. LOC_Os07g46190

LOC_Os07g46190


Description : pectinesterase, putative, expressed


Gene families : OG_42_0000087 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000087_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os07g46190
Cluster HCCA clusters: cluster_0070

Target Alias Description ECC score Gene Family Method Actions
A4A49_28049 No alias putative pectinesterase 8 0.02 Orthogroups_2024-Update
At3g17060 No alias Probable pectinesterase 67... 0.03 Orthogroups_2024-Update
GRMZM2G070913 No alias pectinesterase 11 0.03 Orthogroups_2024-Update
Glyma.01G006800 No alias Pectin lyase-like superfamily protein 0.03 Orthogroups_2024-Update
Glyma.01G068100 No alias Pectin lyase-like superfamily protein 0.03 Orthogroups_2024-Update
MA_6149868g0010 No alias (at2g36710 : 275.0) Pectin lyase-like superfamily... 0.02 Orthogroups_2024-Update
PSME_00022123-RA No alias (at3g29090 : 421.0) Encodes an atypical pectin... 0.02 Orthogroups_2024-Update
Potri.001G364200 No alias Pectin lyase-like superfamily protein 0.02 Orthogroups_2024-Update
Potri.008G104800 No alias Pectin lyase-like superfamily protein 0.02 Orthogroups_2024-Update
Potri.017G054700 No alias Pectin lyase-like superfamily protein 0.02 Orthogroups_2024-Update
Pp1s175_19V6 No alias pectin methylesterase 0.02 Orthogroups_2024-Update
Solyc09g091730 No alias Pectinesterase (AHRD V3.3 *** K4CWJ9_SOLLC) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0030599 pectinesterase activity IEA InterProScan predictions
BP GO:0042545 cell wall modification IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0005215 transporter activity IEP Predicted GO
MF GO:0022857 transmembrane transporter activity IEP Predicted GO
CC GO:0031012 extracellular matrix IEP Predicted GO
CC GO:0044421 extracellular region part IEP Predicted GO
InterPro domains Description Start Stop
IPR000070 Pectinesterase_cat 48 305
No external refs found!