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  5. LOC_Os07g46600

LOC_Os07g46600


Description : RNA pseudouridine synthase, putative, expressed


Gene families : OG_42_0005179 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0005179_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os07g46600
Cluster HCCA clusters: cluster_0129


Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEA InterProScan predictions
MF GO:0003723 RNA binding IEA InterProScan predictions
BP GO:0009451 RNA modification IEA InterProScan predictions
MF GO:0009982 pseudouridine synthase activity IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP Predicted GO
MF GO:0004674 protein serine/threonine kinase activity IEP Predicted GO
BP GO:0006351 transcription, DNA-templated IEP Predicted GO
BP GO:0009116 nucleoside metabolic process IEP Predicted GO
CC GO:0009521 photosystem IEP Predicted GO
CC GO:0009523 photosystem II IEP Predicted GO
CC GO:0009654 photosystem II oxygen evolving complex IEP Predicted GO
BP GO:0015979 photosynthesis IEP Predicted GO
CC GO:0019898 extrinsic component of membrane IEP Predicted GO
MF GO:0034062 5'-3' RNA polymerase activity IEP Predicted GO
CC GO:0044436 thylakoid part IEP Predicted GO
BP GO:0097659 nucleic acid-templated transcription IEP Predicted GO
MF GO:0097747 RNA polymerase activity IEP Predicted GO
BP GO:1901657 glycosyl compound metabolic process IEP Predicted GO
CC GO:1990204 oxidoreductase complex IEP Predicted GO
InterPro domains Description Start Stop
IPR006145 PsdUridine_synth_RsuA/RluD 137 306
No external refs found!