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  5. LOC_Os07g47510

LOC_Os07g47510


Description : stress-related protein, putative, expressed


Gene families : OG_42_0001183 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001183_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os07g47510
Cluster HCCA clusters: cluster_0049

Target Alias Description ECC score Gene Family Method Actions
At2g47780 No alias REF/SRPP-like protein At2g47780... 0.02 Orthogroups_2024-Update
Kfl00024_0290 kfl00024_0290_v1.1 (at2g47780 : 98.6) Rubber elongation factor protein... 0.02 Orthogroups_2024-Update
PSME_00023535-RA No alias (at3g05500 : 89.7) Rubber elongation factor protein... 0.02 Orthogroups_2024-Update
Seita.2G425600.1 No alias lipid droplet-associated factor *(LDAP) 0.03 Orthogroups_2024-Update
Seita.3G036300.1 No alias lipid droplet-associated factor *(LDAP) 0.04 Orthogroups_2024-Update
Sobic.009G046600.2 No alias lipid droplet-associated factor *(LDAP) 0.03 Orthogroups_2024-Update
Solyc05g015390 No alias Rubber elongation factor protein (AHRD V3.3 *** A0A072TUR8_MEDTR) 0.02 Orthogroups_2024-Update
Sopen05g010680 No alias Rubber elongation factor protein (REF) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0001882 nucleoside binding IEP Predicted GO
MF GO:0001883 purine nucleoside binding IEP Predicted GO
MF GO:0003682 chromatin binding IEP Predicted GO
MF GO:0004527 exonuclease activity IEP Predicted GO
MF GO:0005525 GTP binding IEP Predicted GO
BP GO:0006835 dicarboxylic acid transport IEP Predicted GO
MF GO:0008408 3'-5' exonuclease activity IEP Predicted GO
MF GO:0008483 transaminase activity IEP Predicted GO
CC GO:0009522 photosystem I IEP Predicted GO
BP GO:0015711 organic anion transport IEP Predicted GO
BP GO:0015740 C4-dicarboxylate transport IEP Predicted GO
BP GO:0015743 malate transport IEP Predicted GO
BP GO:0015849 organic acid transport IEP Predicted GO
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP Predicted GO
MF GO:0019001 guanyl nucleotide binding IEP Predicted GO
MF GO:0032549 ribonucleoside binding IEP Predicted GO
MF GO:0032550 purine ribonucleoside binding IEP Predicted GO
MF GO:0032561 guanyl ribonucleotide binding IEP Predicted GO
BP GO:0046942 carboxylic acid transport IEP Predicted GO
InterPro domains Description Start Stop
IPR008802 REF 18 238
No external refs found!