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  5. LOC_Os07g47530

LOC_Os07g47530


Description : AAA-type ATPase family protein, putative, expressed


Gene families : OG_42_0000296 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000296_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os07g47530
Cluster HCCA clusters: cluster_0107

Target Alias Description ECC score Gene Family Method Actions
166381 No alias AAA-type ATPase family protein 0.03 Orthogroups_2024-Update
440620 No alias P-loop containing nucleoside triphosphate hydrolases... 0.02 Orthogroups_2024-Update
Bradi1g62731 No alias AAA-type ATPase family protein 0.04 Orthogroups_2024-Update
Bradi2g15490 No alias P-loop containing nucleoside triphosphate hydrolases... 0.02 Orthogroups_2024-Update
Brara.A02855.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Brara.B02612.1 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU3Hr1G055830.5 No alias Unknown function 0.02 Orthogroups_2024-Update
Kfl00036_0350 kfl00036_0350_v1.1 (at4g02480 : 517.0) AAA-type ATPase family protein;... 0.01 Orthogroups_2024-Update
Kfl00036_0360 kfl00036_0360_v1.1 (at4g02480 : 695.0) AAA-type ATPase family protein;... 0.01 Orthogroups_2024-Update
Kfl00055_0110 kfl00055_0110_v1.1 (at4g02480 : 607.0) AAA-type ATPase family protein;... 0.01 Orthogroups_2024-Update
Kfl00238_0170 kfl00238_0170_v1.1 (at1g02890 : 595.0) AAA-type ATPase family protein;... 0.02 Orthogroups_2024-Update
Mp3g22890.1 No alias ATPase family AAA domain-containing protein FIGL1... 0.01 Orthogroups_2024-Update
Mp5g19800.1 No alias Katanin p60 ATPase-containing subunit A1 OS=Arabidopsis... 0.02 Orthogroups_2024-Update
PSME_00002806-RA No alias (at3g19740 : 352.0) P-loop containing nucleoside... 0.03 Orthogroups_2024-Update
PSME_00020709-RA No alias (at4g02480 : 374.0) AAA-type ATPase family protein;... 0.02 Orthogroups_2024-Update
Potri.002G205900 No alias AAA-type ATPase family protein 0.02 Orthogroups_2024-Update
Sobic.005G207500.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Solyc09g074950 No alias ATPase family AAA domain-containing protein 1 (AHRD V3.3... 0.03 Orthogroups_2024-Update
Sopen03g030090 No alias ATPase family associated with various cellular activities (AAA) 0.02 Orthogroups_2024-Update
Sopen06g035910 No alias ATPase family associated with various cellular activities (AAA) 0.02 Orthogroups_2024-Update
evm.model.tig00021179.32 No alias (at4g02480 : 356.0) AAA-type ATPase family protein;... 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEP Predicted GO
BP GO:0000184 nuclear-transcribed mRNA catabolic process, nonsense-mediated decay IEP Predicted GO
BP GO:0000956 nuclear-transcribed mRNA catabolic process IEP Predicted GO
MF GO:0003852 2-isopropylmalate synthase activity IEP Predicted GO
MF GO:0004559 alpha-mannosidase activity IEP Predicted GO
MF GO:0004571 mannosyl-oligosaccharide 1,2-alpha-mannosidase activity IEP Predicted GO
MF GO:0004673 protein histidine kinase activity IEP Predicted GO
MF GO:0005096 GTPase activator activity IEP Predicted GO
MF GO:0005509 calcium ion binding IEP Predicted GO
BP GO:0006338 chromatin remodeling IEP Predicted GO
BP GO:0006401 RNA catabolic process IEP Predicted GO
BP GO:0006402 mRNA catabolic process IEP Predicted GO
BP GO:0006551 leucine metabolic process IEP Predicted GO
BP GO:0006886 intracellular protein transport IEP Predicted GO
BP GO:0008104 protein localization IEP Predicted GO
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP Predicted GO
MF GO:0008536 Ran GTPase binding IEP Predicted GO
BP GO:0009081 branched-chain amino acid metabolic process IEP Predicted GO
BP GO:0009082 branched-chain amino acid biosynthetic process IEP Predicted GO
BP GO:0009098 leucine biosynthetic process IEP Predicted GO
BP GO:0009892 negative regulation of metabolic process IEP Predicted GO
BP GO:0010605 negative regulation of macromolecule metabolic process IEP Predicted GO
BP GO:0010629 negative regulation of gene expression IEP Predicted GO
BP GO:0015031 protein transport IEP Predicted GO
BP GO:0015833 peptide transport IEP Predicted GO
MF GO:0015923 mannosidase activity IEP Predicted GO
MF GO:0015924 mannosyl-oligosaccharide mannosidase activity IEP Predicted GO
BP GO:0016043 cellular component organization IEP Predicted GO
BP GO:0016192 vesicle-mediated transport IEP Predicted GO
BP GO:0016197 endosomal transport IEP Predicted GO
BP GO:0016226 iron-sulfur cluster assembly IEP Predicted GO
BP GO:0016482 cytosolic transport IEP Predicted GO
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP Predicted GO
MF GO:0016832 aldehyde-lyase activity IEP Predicted GO
CC GO:0030906 retromer, cargo-selective complex IEP Predicted GO
BP GO:0031163 metallo-sulfur cluster assembly IEP Predicted GO
MF GO:0031491 nucleosome binding IEP Predicted GO
BP GO:0033036 macromolecule localization IEP Predicted GO
BP GO:0042147 retrograde transport, endosome to Golgi IEP Predicted GO
BP GO:0042886 amide transport IEP Predicted GO
MF GO:0043015 gamma-tubulin binding IEP Predicted GO
BP GO:0043044 ATP-dependent chromatin remodeling IEP Predicted GO
MF GO:0044877 protein-containing complex binding IEP Predicted GO
BP GO:0045184 establishment of protein localization IEP Predicted GO
BP GO:0046907 intracellular transport IEP Predicted GO
MF GO:0046912 transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer IEP Predicted GO
BP GO:0048519 negative regulation of biological process IEP Predicted GO
BP GO:0051641 cellular localization IEP Predicted GO
BP GO:0051649 establishment of localization in cell IEP Predicted GO
BP GO:0071702 organic substance transport IEP Predicted GO
BP GO:0071705 nitrogen compound transport IEP Predicted GO
BP GO:0071840 cellular component organization or biogenesis IEP Predicted GO
MF GO:0098599 palmitoyl hydrolase activity IEP Predicted GO
MF GO:0140096 catalytic activity, acting on a protein IEP Predicted GO
InterPro domains Description Start Stop
IPR003959 ATPase_AAA_core 817 946
No external refs found!