LOC_Os07g48550

Description : no apical meristem protein, putative, expressed

Gene families : OG_42_0000017 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000017_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Oryza release: LOC_Os07g48550
Cluster	HCCA clusters: cluster_0010

Target	Alias	Description	ECC score	Gene Family Method
89986	No alias	NAC domain containing protein 76	0.02	Orthogroups_2024-Update
A4A49_37077	No alias	nac domain-containing protein 100	0.04	Orthogroups_2024-Update
A4A49_58267	No alias	hypothetical protein	0.03	Orthogroups_2024-Update
At1g12260	No alias	NAC domain-containing protein 7...	0.03	Orthogroups_2024-Update
At2g27300	No alias	NAC domain-containing protein 40...	0.02	Orthogroups_2024-Update
At4g10350	No alias	Protein BEARSKIN2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SV87]	0.03	Orthogroups_2024-Update
At4g17980	No alias	NAC domain containing protein 71 [Source:TAIR;Acc:AT4G17980]	0.02	Orthogroups_2024-Update
At5g22290	No alias	NAC domain-containing protein 89...	0.03	Orthogroups_2024-Update
At5g39610	No alias	NAC domain-containing protein 92...	0.02	Orthogroups_2024-Update
At5g64060	No alias	NAC domain containing protein 103...	0.03	Orthogroups_2024-Update
Bradi1g63630	No alias	Arabidopsis NAC domain containing protein 87	0.04	Orthogroups_2024-Update
Bradi1g76732	No alias	vascular related NAC-domain protein 1	0.03	Orthogroups_2024-Update
Bradi3g13727	No alias	NAC (No Apical Meristem) domain transcriptional...	0.02	Orthogroups_2024-Update
Bradi5g21010	No alias	NAC domain containing protein 2	0.01	Orthogroups_2024-Update
Bradi5g27467	No alias	NAC domain containing protein 76	0.02	Orthogroups_2024-Update
Brara.A00921.1	No alias	NAC-type transcription factor	0.03	Orthogroups_2024-Update
Brara.B00763.1	No alias	NAC-type transcription factor	0.02	Orthogroups_2024-Update
Brara.B00960.1	No alias	NAC-type transcription factor	0.02	Orthogroups_2024-Update
Brara.B02268.1	No alias	NAC-type transcription factor	0.03	Orthogroups_2024-Update
Brara.B03769.1	No alias	NAC-type transcription factor	0.03	Orthogroups_2024-Update
Brara.E01892.1	No alias	NAC-type transcription factor	0.02	Orthogroups_2024-Update
Brara.E03531.1	No alias	NAC-type transcription factor	0.02	Orthogroups_2024-Update
GRMZM2G440219	No alias	NAC 007	0.02	Orthogroups_2024-Update
Glyma.04G167200	No alias	NAC domain containing protein 100	0.02	Orthogroups_2024-Update
Glyma.06G080200	No alias	NAC domain containing protein 38	0.02	Orthogroups_2024-Update
Glyma.06G195500	No alias	NAC domain containing protein 100	0.02	Orthogroups_2024-Update
Glyma.12G226500	No alias	NAC (No Apical Meristem) domain transcriptional...	0.03	Orthogroups_2024-Update
Glyma.14G210000	No alias	NAC domain containing protein 28	0.02	Orthogroups_2024-Update
HORVU2Hr1G017350.1	No alias	NAC-type transcription factor	0.03	Orthogroups_2024-Update
HORVU2Hr1G017400.3	No alias	NAC-type transcription factor	0.02	Orthogroups_2024-Update
HORVU4Hr1G085320.4	No alias	NAC-type transcription factor	0.02	Orthogroups_2024-Update
MA_6571438g0010	No alias	no hits & (original description: no original description)	0.02	Orthogroups_2024-Update
PSME_00009079-RA	No alias	(at1g65910 : 290.0) NAC domain containing protein 28...	0.04	Orthogroups_2024-Update
PSME_00014399-RA	No alias	(at5g53950 : 274.0) Transcriptional activator of the NAC...	0.02	Orthogroups_2024-Update
PSME_00030678-RA	No alias	(at1g65910 : 262.0) NAC domain containing protein 28...	0.03	Orthogroups_2024-Update
PSME_00053123-RA	No alias	(at5g53950 : 278.0) Transcriptional activator of the NAC...	0.03	Orthogroups_2024-Update
Potri.001G120000	No alias	NAC 007	0.02	Orthogroups_2024-Update
Potri.006G277000	No alias	NAC domain containing protein 38	0.02	Orthogroups_2024-Update
Potri.008G081500	No alias	NAC domain containing protein 20	0.04	Orthogroups_2024-Update
Potri.009G161300	No alias	NTM1-like 8	0.02	Orthogroups_2024-Update
Potri.010G176600	No alias	NAC (No Apical Meristem) domain transcriptional...	0.02	Orthogroups_2024-Update
Potri.011G115400	No alias	NAC (No Apical Meristem) domain transcriptional...	0.03	Orthogroups_2024-Update
Potri.011G153300	No alias	NAC (No Apical Meristem) domain transcriptional...	0.03	Orthogroups_2024-Update
Potri.015G127400	No alias	NAC 007	0.02	Orthogroups_2024-Update
Potri.017G086200	No alias	NAC domain containing protein 100	0.02	Orthogroups_2024-Update
Pp1s223_12V6	No alias	nac domain ipr003441	0.02	Orthogroups_2024-Update
Pp1s288_4V6	No alias	no apical meristem	0.02	Orthogroups_2024-Update
Pp1s8_36V6	No alias	nac domain ipr003441	0.02	Orthogroups_2024-Update
Seita.1G209000.1	No alias	NAC-type transcription factor	0.02	Orthogroups_2024-Update
Seita.3G000500.1	No alias	NAC-type transcription factor	0.01	Orthogroups_2024-Update
Seita.8G008000.1	No alias	NAC-type transcription factor	0.02	Orthogroups_2024-Update
Seita.9G557600.1	No alias	NAC-type transcription factor	0.02	Orthogroups_2024-Update
Solyc05g055480	No alias	NAC (AHRD V3.3 *** J7H8R1_CESNO)	0.02	Orthogroups_2024-Update
Solyc06g074170	No alias	NAC domain protein, (AHRD V3.3 *** A0A061GVZ7_THECC)	0.02	Orthogroups_2024-Update
Solyc08g008660	No alias	NAC domain-containing protein, putative (AHRD V3.3 ***...	0.03	Orthogroups_2024-Update
Sopen10g001020	No alias	No apical meristem (NAM) protein	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	InterProScan predictions
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	InterProScan predictions
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0003006	developmental process involved in reproduction	IEP	Predicted GO
MF	GO:0004332	fructose-bisphosphate aldolase activity	IEP	Predicted GO
CC	GO:0005743	mitochondrial inner membrane	IEP	Predicted GO
BP	GO:0006351	transcription, DNA-templated	IEP	Predicted GO
BP	GO:0006811	ion transport	IEP	Predicted GO
BP	GO:0006812	cation transport	IEP	Predicted GO
BP	GO:0006839	mitochondrial transport	IEP	Predicted GO
BP	GO:0006848	pyruvate transport	IEP	Predicted GO
BP	GO:0006850	mitochondrial pyruvate transmembrane transport	IEP	Predicted GO
BP	GO:0006873	cellular ion homeostasis	IEP	Predicted GO
BP	GO:0006875	cellular metal ion homeostasis	IEP	Predicted GO
BP	GO:0006879	cellular iron ion homeostasis	IEP	Predicted GO
MF	GO:0008199	ferric iron binding	IEP	Predicted GO
BP	GO:0009690	cytokinin metabolic process	IEP	Predicted GO
BP	GO:0009719	response to endogenous stimulus	IEP	Predicted GO
BP	GO:0009725	response to hormone	IEP	Predicted GO
BP	GO:0009733	response to auxin	IEP	Predicted GO
BP	GO:0009790	embryo development	IEP	Predicted GO
BP	GO:0009793	embryo development ending in seed dormancy	IEP	Predicted GO
BP	GO:0010033	response to organic substance	IEP	Predicted GO
MF	GO:0010277	chlorophyllide a oxygenase [overall] activity	IEP	Predicted GO
BP	GO:0010817	regulation of hormone levels	IEP	Predicted GO
BP	GO:0015718	monocarboxylic acid transport	IEP	Predicted GO
BP	GO:0015849	organic acid transport	IEP	Predicted GO
CC	GO:0016021	integral component of membrane	IEP	Predicted GO
MF	GO:0016491	oxidoreductase activity	IEP	Predicted GO
MF	GO:0016627	oxidoreductase activity, acting on the CH-CH group of donors	IEP	Predicted GO
MF	GO:0016636	oxidoreductase activity, acting on the CH-CH group of donors, iron-sulfur protein as acceptor	IEP	Predicted GO
MF	GO:0016645	oxidoreductase activity, acting on the CH-NH group of donors	IEP	Predicted GO
MF	GO:0016701	oxidoreductase activity, acting on single donors with incorporation of molecular oxygen	IEP	Predicted GO
MF	GO:0016703	oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases)	IEP	Predicted GO
MF	GO:0016832	aldehyde-lyase activity	IEP	Predicted GO
BP	GO:0018130	heterocycle biosynthetic process	IEP	Predicted GO
MF	GO:0019139	cytokinin dehydrogenase activity	IEP	Predicted GO
BP	GO:0019438	aromatic compound biosynthetic process	IEP	Predicted GO
BP	GO:0019725	cellular homeostasis	IEP	Predicted GO
CC	GO:0019866	organelle inner membrane	IEP	Predicted GO
BP	GO:0030001	metal ion transport	IEP	Predicted GO
BP	GO:0030003	cellular cation homeostasis	IEP	Predicted GO
CC	GO:0031012	extracellular matrix	IEP	Predicted GO
CC	GO:0031224	intrinsic component of membrane	IEP	Predicted GO
BP	GO:0032774	RNA biosynthetic process	IEP	Predicted GO
CC	GO:0034357	photosynthetic membrane	IEP	Predicted GO
BP	GO:0034654	nucleobase-containing compound biosynthetic process	IEP	Predicted GO
BP	GO:0034754	cellular hormone metabolic process	IEP	Predicted GO
BP	GO:0042221	response to chemical	IEP	Predicted GO
BP	GO:0042445	hormone metabolic process	IEP	Predicted GO
CC	GO:0042651	thylakoid membrane	IEP	Predicted GO
CC	GO:0044421	extracellular region part	IEP	Predicted GO
CC	GO:0044425	membrane part	IEP	Predicted GO
BP	GO:0046916	cellular transition metal ion homeostasis	IEP	Predicted GO
BP	GO:0046942	carboxylic acid transport	IEP	Predicted GO
BP	GO:0048878	chemical homeostasis	IEP	Predicted GO
MF	GO:0050660	flavin adenine dinucleotide binding	IEP	Predicted GO
BP	GO:0050801	ion homeostasis	IEP	Predicted GO
MF	GO:0051537	2 iron, 2 sulfur cluster binding	IEP	Predicted GO
MF	GO:0051743	red chlorophyll catabolite reductase activity	IEP	Predicted GO
BP	GO:0055065	metal ion homeostasis	IEP	Predicted GO
BP	GO:0055072	iron ion homeostasis	IEP	Predicted GO
BP	GO:0055076	transition metal ion homeostasis	IEP	Predicted GO
BP	GO:0055080	cation homeostasis	IEP	Predicted GO
BP	GO:0055082	cellular chemical homeostasis	IEP	Predicted GO
BP	GO:0065008	regulation of biological quality	IEP	Predicted GO
BP	GO:0097659	nucleic acid-templated transcription	IEP	Predicted GO
BP	GO:0098656	anion transmembrane transport	IEP	Predicted GO
BP	GO:0098771	inorganic ion homeostasis	IEP	Predicted GO
BP	GO:1901475	pyruvate transmembrane transport	IEP	Predicted GO
BP	GO:1903825	organic acid transmembrane transport	IEP	Predicted GO
BP	GO:1905039	carboxylic acid transmembrane transport	IEP	Predicted GO
BP	GO:1990542	mitochondrial transmembrane transport	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR003441	NAC-dom	22	147

External Links

No external refs found!

LOC_Os07g48550

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation