LOC_Os07g48570

Description : expressed protein

Gene families : OG_42_0000027 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000027_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Oryza release: LOC_Os07g48570
Cluster	HCCA clusters: cluster_0010

Target	Alias	Description	ECC score	Gene Family Method
29617	No alias	Dof-type zinc finger DNA-binding family protein	0.02	Orthogroups_2024-Update
A4A49_13356	No alias	cyclic dof factor 3	0.03	Orthogroups_2024-Update
A4A49_24184	No alias	dof zinc finger protein dof3.1	0.02	Orthogroups_2024-Update
AC155434.2_FG006	No alias	cycling DOF factor 3	0.04	Orthogroups_2024-Update
At1g47655	No alias	Dof zinc finger protein DOF1.6...	0.03	Orthogroups_2024-Update
At1g69570	No alias	Cyclic dof factor 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9SEZ3]	0.02	Orthogroups_2024-Update
At2g37590	No alias	Dof zinc finger protein DOF2.4...	0.02	Orthogroups_2024-Update
At3g47500	No alias	Cyclic dof factor 3 [Source:UniProtKB/Swiss-Prot;Acc:Q8LFV3]	0.03	Orthogroups_2024-Update
At5g62430	No alias	Cyclic dof factor 1 [Source:UniProtKB/Swiss-Prot;Acc:Q8W1E3]	0.02	Orthogroups_2024-Update
Bradi1g17410	No alias	cycling DOF factor 3	0.04	Orthogroups_2024-Update
Bradi2g09720	No alias	cycling DOF factor 2	0.04	Orthogroups_2024-Update
Bradi3g51510	No alias	Dof-type zinc finger DNA-binding family protein	0.03	Orthogroups_2024-Update
Bradi3g56380	No alias	OBF binding protein 4	0.03	Orthogroups_2024-Update
Brara.D01705.1	No alias	transcription factor *(DOF)	0.03	Orthogroups_2024-Update
Brara.F01753.1	No alias	transcription factor *(DOF)	0.06	Orthogroups_2024-Update
GRMZM2G123900	No alias	Dof-type zinc finger DNA-binding family protein	0.02	Orthogroups_2024-Update
GRMZM2G134545	No alias	TARGET OF MONOPTEROS 6	0.02	Orthogroups_2024-Update
GRMZM2G142718	No alias	Dof-type zinc finger DNA-binding family protein	0.03	Orthogroups_2024-Update
GRMZM2G144172	No alias	OBF-binding protein 3	0.03	Orthogroups_2024-Update
GRMZM2G162749	No alias	cycling DOF factor 1	0.04	Orthogroups_2024-Update
GRMZM2G179069	No alias	OBF-binding protein 3	0.03	Orthogroups_2024-Update
GRMZM2G394941	No alias	OBF binding protein 4	0.03	Orthogroups_2024-Update
Glyma.01G049400	No alias	cycling DOF factor 3	0.04	Orthogroups_2024-Update
Glyma.03G007950	No alias	cycling DOF factor 3	0.02	Orthogroups_2024-Update
Glyma.04G168300	No alias	cycling DOF factor 3	0.04	Orthogroups_2024-Update
Glyma.05G018100	No alias	OBF binding protein 4	0.03	Orthogroups_2024-Update
Glyma.05G025900	No alias	cycling DOF factor 3	0.06	Orthogroups_2024-Update
Glyma.05G158200	No alias	Dof-type zinc finger DNA-binding family protein	0.02	Orthogroups_2024-Update
Glyma.06G124300	No alias	Dof-type zinc finger DNA-binding family protein	0.03	Orthogroups_2024-Update
Glyma.06G194800	No alias	cycling DOF factor 3	0.04	Orthogroups_2024-Update
Glyma.07G229600	No alias	cycling DOF factor 2	0.04	Orthogroups_2024-Update
Glyma.08G195300	No alias	DOF zinc finger protein 1	0.03	Orthogroups_2024-Update
Glyma.12G072400	No alias	Dof-type zinc finger DNA-binding family protein	0.03	Orthogroups_2024-Update
Glyma.13G241900	No alias	Dof-type zinc finger DNA-binding family protein	0.03	Orthogroups_2024-Update
Glyma.13G335200	No alias	OBF-binding protein 3	0.02	Orthogroups_2024-Update
Glyma.15G039300	No alias	OBF-binding protein 3	0.03	Orthogroups_2024-Update
Glyma.16G022900	No alias	Dof-type zinc finger DNA-binding family protein	0.02	Orthogroups_2024-Update
Glyma.19G023200	No alias	cycling DOF factor 2	0.02	Orthogroups_2024-Update
HORVU1Hr1G074140.1	No alias	transcription factor *(DOF)	0.04	Orthogroups_2024-Update
HORVU2Hr1G017290.1	No alias	transcription factor *(DOF)	0.02	Orthogroups_2024-Update
HORVU4Hr1G074990.1	No alias	transcription factor *(DOF)	0.06	Orthogroups_2024-Update
HORVU5Hr1G021290.1	No alias	transcription factor *(DOF)	0.02	Orthogroups_2024-Update
PSME_00028077-RA	No alias	(at5g39660 : 211.0) Dof-type zinc finger...	0.02	Orthogroups_2024-Update
PSME_00053408-RA	No alias	(at5g39660 : 183.0) Dof-type zinc finger...	0.03	Orthogroups_2024-Update
Potri.002G129600	No alias	Dof-type zinc finger DNA-binding family protein	0.03	Orthogroups_2024-Update
Potri.004G038800	No alias	OBF binding protein 4	0.03	Orthogroups_2024-Update
Potri.011G047500	No alias	OBF binding protein 4	0.02	Orthogroups_2024-Update
Pp1s124_139V6	No alias	zinc finger	0.02	Orthogroups_2024-Update
Pp1s12_364V6	No alias	zinc finger	0.02	Orthogroups_2024-Update
Pp1s169_171V6	No alias	cycling dof factor 2	0.02	Orthogroups_2024-Update
Pp1s351_46V6	No alias	zinc finger	0.03	Orthogroups_2024-Update
Seita.1G303300.1	No alias	transcription factor *(DOF)	0.03	Orthogroups_2024-Update
Seita.2G436800.1	No alias	transcription factor *(DOF)	0.05	Orthogroups_2024-Update
Seita.5G052700.1	No alias	transcription factor *(DOF)	0.03	Orthogroups_2024-Update
Seita.5G266800.1	No alias	transcription factor *(DOF)	0.01	Orthogroups_2024-Update
Seita.9G525000.1	No alias	transcription factor *(DOF)	0.05	Orthogroups_2024-Update
Sobic.002G421900.1	No alias	transcription factor *(DOF)	0.08	Orthogroups_2024-Update
Sobic.006G267900.1	No alias	transcription factor *(DOF)	0.02	Orthogroups_2024-Update
Solyc02g078620	No alias	Dof zinc finger protein (AHRD V3.3 *** W9RD26_9ROSA)	0.02	Orthogroups_2024-Update
Solyc02g088070	No alias	Dof zinc finger protein (AHRD V3.3 *** W9QEV1_9ROSA)	0.02	Orthogroups_2024-Update
Solyc03g115940	No alias	Dof zinc finger protein (AHRD V3.3 *** C4B6D7_IPOBA)	0.06	Orthogroups_2024-Update
Solyc06g069760	No alias	Dof zinc finger protein 22	0.08	Orthogroups_2024-Update
Solyc11g010940	No alias	Dof zinc finger protein (AHRD V3.3 *** W9T134_9ROSA)	0.03	Orthogroups_2024-Update
Sopen03g034940	No alias	Dof domain, zinc finger	0.03	Orthogroups_2024-Update
Sopen03g040210	No alias	Dof domain, zinc finger	0.02	Orthogroups_2024-Update
Sopen06g027050	No alias	Dof domain, zinc finger	0.04	Orthogroups_2024-Update
Sopen06g027770	No alias	Dof domain, zinc finger	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	InterProScan predictions
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	InterProScan predictions
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
MF	GO:0000774	adenyl-nucleotide exchange factor activity	IEP	Predicted GO
MF	GO:0003839	gamma-glutamylcyclotransferase activity	IEP	Predicted GO
MF	GO:0005092	GDP-dissociation inhibitor activity	IEP	Predicted GO
CC	GO:0005743	mitochondrial inner membrane	IEP	Predicted GO
BP	GO:0006575	cellular modified amino acid metabolic process	IEP	Predicted GO
BP	GO:0006749	glutathione metabolic process	IEP	Predicted GO
BP	GO:0006751	glutathione catabolic process	IEP	Predicted GO
BP	GO:0006810	transport	IEP	Predicted GO
BP	GO:0006811	ion transport	IEP	Predicted GO
BP	GO:0006812	cation transport	IEP	Predicted GO
BP	GO:0006839	mitochondrial transport	IEP	Predicted GO
BP	GO:0006848	pyruvate transport	IEP	Predicted GO
BP	GO:0006850	mitochondrial pyruvate transmembrane transport	IEP	Predicted GO
BP	GO:0007165	signal transduction	IEP	Predicted GO
BP	GO:0007264	small GTPase mediated signal transduction	IEP	Predicted GO
BP	GO:0009143	nucleoside triphosphate catabolic process	IEP	Predicted GO
MF	GO:0015291	secondary active transmembrane transporter activity	IEP	Predicted GO
MF	GO:0015297	antiporter activity	IEP	Predicted GO
BP	GO:0015718	monocarboxylic acid transport	IEP	Predicted GO
BP	GO:0015849	organic acid transport	IEP	Predicted GO
CC	GO:0016021	integral component of membrane	IEP	Predicted GO
MF	GO:0016842	amidine-lyase activity	IEP	Predicted GO
CC	GO:0019866	organelle inner membrane	IEP	Predicted GO
BP	GO:0030001	metal ion transport	IEP	Predicted GO
CC	GO:0031224	intrinsic component of membrane	IEP	Predicted GO
BP	GO:0035556	intracellular signal transduction	IEP	Predicted GO
BP	GO:0042219	cellular modified amino acid catabolic process	IEP	Predicted GO
MF	GO:0042802	identical protein binding	IEP	Predicted GO
MF	GO:0042803	protein homodimerization activity	IEP	Predicted GO
BP	GO:0043171	peptide catabolic process	IEP	Predicted GO
BP	GO:0044273	sulfur compound catabolic process	IEP	Predicted GO
CC	GO:0044425	membrane part	IEP	Predicted GO
BP	GO:0046942	carboxylic acid transport	IEP	Predicted GO
MF	GO:0047429	nucleoside-triphosphate diphosphatase activity	IEP	Predicted GO
MF	GO:0051087	chaperone binding	IEP	Predicted GO
BP	GO:0051179	localization	IEP	Predicted GO
BP	GO:0051187	cofactor catabolic process	IEP	Predicted GO
BP	GO:0051234	establishment of localization	IEP	Predicted GO
MF	GO:0060589	nucleoside-triphosphatase regulator activity	IEP	Predicted GO
MF	GO:0060590	ATPase regulator activity	IEP	Predicted GO
BP	GO:0098656	anion transmembrane transport	IEP	Predicted GO
BP	GO:1901475	pyruvate transmembrane transport	IEP	Predicted GO
BP	GO:1903825	organic acid transmembrane transport	IEP	Predicted GO
BP	GO:1905039	carboxylic acid transmembrane transport	IEP	Predicted GO
BP	GO:1990542	mitochondrial transmembrane transport	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR003851	Znf_Dof	106	162

External Links

No external refs found!

LOC_Os07g48570

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation