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  5. LOC_Os07g48870

LOC_Os07g48870


Description : MYB family transcription factor, putative, expressed


Gene families : OG_42_0000002 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os07g48870
Cluster HCCA clusters: cluster_0103

Target Alias Description ECC score Gene Family Method Actions
A4A49_11057 No alias transcription factor myb86 0.02 Orthogroups_2024-Update
At3g01530 No alias Transcription factor MYB57... 0.02 Orthogroups_2024-Update
At4g25560 No alias Transcription factor LAF1... 0.03 Orthogroups_2024-Update
At5g40350 No alias Transcription factor MYB24... 0.03 Orthogroups_2024-Update
Bradi1g26920 No alias myb domain protein 67 0.02 Orthogroups_2024-Update
Bradi4g23967 No alias myb domain protein 4 0.03 Orthogroups_2024-Update
Brara.F03146.1 No alias transcriptional regulator *(TDF1) 0.03 Orthogroups_2024-Update
GRMZM2G011422 No alias myb domain protein 36 0.02 Orthogroups_2024-Update
GRMZM2G126566 No alias myb domain protein 20 0.03 Orthogroups_2024-Update
GRMZM2G160840 No alias myb domain protein 78 0.03 Orthogroups_2024-Update
GRMZM2G173633 No alias myb domain protein 103 0.03 Orthogroups_2024-Update
Glyma.06G160500 No alias myb domain protein 4 0.03 Orthogroups_2024-Update
Glyma.11G009400 No alias myb domain protein 107 0.02 Orthogroups_2024-Update
Glyma.12G106400 No alias MYB-like 102 0.03 Orthogroups_2024-Update
Glyma.12G237500 No alias myb domain protein 83 0.02 Orthogroups_2024-Update
Glyma.13G247200 No alias MYB-like 102 0.05 Orthogroups_2024-Update
Glyma.13G333200 No alias myb domain protein 48 0.04 Orthogroups_2024-Update
HORVU0Hr1G006810.2 No alias MYB class-R2R3 transcription factor 0.03 Orthogroups_2024-Update
HORVU4Hr1G079580.2 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU5Hr1G045550.1 No alias MYB class-R2R3 subgroup-1 transcription factor 0.02 Orthogroups_2024-Update
HORVU5Hr1G098540.1 No alias MYB class-R2R3 subgroup-14 transcription factor 0.02 Orthogroups_2024-Update
LOC_Os01g50720 No alias MYB family transcription factor, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os02g42870 No alias MYB family transcription factor, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os11g47460 No alias MYB family transcription factor, putative, expressed 0.02 Orthogroups_2024-Update
Mp3g07510.1 No alias transcription factor (MYB) 0.02 Orthogroups_2024-Update
PSME_00012903-RA No alias (p10290|mybc_maize : 180.0) Anthocyanin regulatory C1... 0.02 Orthogroups_2024-Update
PSME_00021445-RA No alias (at1g22640 : 169.0) MYB-type transcription factor (MYB3)... 0.02 Orthogroups_2024-Update
PSME_00030703-RA No alias (p10290|mybc_maize : 187.0) Anthocyanin regulatory C1... 0.03 Orthogroups_2024-Update
PSME_00052777-RA No alias (at4g38620 : 269.0) Encodes a R2R3 MYB protein which is... 0.02 Orthogroups_2024-Update
Potri.001G267300 No alias myb domain protein 83 0.02 Orthogroups_2024-Update
Potri.004G174400 No alias myb domain protein 4 0.02 Orthogroups_2024-Update
Potri.005G164900 No alias myb domain protein 93 0.03 Orthogroups_2024-Update
Potri.008G101400 No alias myb domain protein 108 0.03 Orthogroups_2024-Update
Potri.013G149200 No alias myb domain protein 14 0.03 Orthogroups_2024-Update
Seita.4G086300.1 No alias Unknown function 0.05 Orthogroups_2024-Update
Seita.9G204400.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.001G404400.2 No alias transcriptional regulator *(TDF1) & MYB class-R2R3... 0.04 Orthogroups_2024-Update
Sobic.002G275500.3 No alias MYB class-R2R3 transcription factor 0.02 Orthogroups_2024-Update
Sobic.003G331100.1 No alias MYB class-R2R3 subgroup-18 transcription factor 0.02 Orthogroups_2024-Update
Sobic.004G248700.1 No alias MYB class-R2R3 transcription factor 0.04 Orthogroups_2024-Update
Sobic.005G062000.2 No alias MYB class-R2R3 subgroup-4 transcription factor 0.04 Orthogroups_2024-Update
Sobic.009G016633.1 No alias MYB class-R2R3 transcription factor 0.03 Orthogroups_2024-Update
Solyc06g053610 No alias R2R3MYB transcription factor 14 0.03 Orthogroups_2024-Update
Sopen02g032700 No alias Myb-like DNA-binding domain 0.02 Orthogroups_2024-Update
Sopen03g035070 No alias Myb-like DNA-binding domain 0.03 Orthogroups_2024-Update
Sopen05g003580 No alias Myb-like DNA-binding domain 0.03 Orthogroups_2024-Update
Sopen07g026840 No alias Myb-like DNA-binding domain 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004888 transmembrane signaling receptor activity IEP Predicted GO
MF GO:0004970 ionotropic glutamate receptor activity IEP Predicted GO
MF GO:0005215 transporter activity IEP Predicted GO
MF GO:0005216 ion channel activity IEP Predicted GO
MF GO:0005230 extracellular ligand-gated ion channel activity IEP Predicted GO
MF GO:0005244 voltage-gated ion channel activity IEP Predicted GO
MF GO:0005247 voltage-gated chloride channel activity IEP Predicted GO
MF GO:0005253 anion channel activity IEP Predicted GO
MF GO:0005254 chloride channel activity IEP Predicted GO
BP GO:0006810 transport IEP Predicted GO
BP GO:0006821 chloride transport IEP Predicted GO
MF GO:0008066 glutamate receptor activity IEP Predicted GO
MF GO:0008308 voltage-gated anion channel activity IEP Predicted GO
MF GO:0008509 anion transmembrane transporter activity IEP Predicted GO
BP GO:0009116 nucleoside metabolic process IEP Predicted GO
BP GO:0009119 ribonucleoside metabolic process IEP Predicted GO
MF GO:0015035 protein disulfide oxidoreductase activity IEP Predicted GO
MF GO:0015036 disulfide oxidoreductase activity IEP Predicted GO
MF GO:0015075 ion transmembrane transporter activity IEP Predicted GO
MF GO:0015103 inorganic anion transmembrane transporter activity IEP Predicted GO
MF GO:0015108 chloride transmembrane transporter activity IEP Predicted GO
MF GO:0015267 channel activity IEP Predicted GO
MF GO:0015276 ligand-gated ion channel activity IEP Predicted GO
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP Predicted GO
BP GO:0015698 inorganic anion transport IEP Predicted GO
BP GO:0015969 guanosine tetraphosphate metabolic process IEP Predicted GO
CC GO:0016020 membrane IEP Predicted GO
BP GO:0019725 cellular homeostasis IEP Predicted GO
MF GO:0022803 passive transmembrane transporter activity IEP Predicted GO
MF GO:0022824 transmitter-gated ion channel activity IEP Predicted GO
MF GO:0022832 voltage-gated channel activity IEP Predicted GO
MF GO:0022834 ligand-gated channel activity IEP Predicted GO
MF GO:0022835 transmitter-gated channel activity IEP Predicted GO
MF GO:0022836 gated channel activity IEP Predicted GO
MF GO:0022838 substrate-specific channel activity IEP Predicted GO
MF GO:0022839 ion gated channel activity IEP Predicted GO
MF GO:0022857 transmembrane transporter activity IEP Predicted GO
MF GO:0030594 neurotransmitter receptor activity IEP Predicted GO
BP GO:0033865 nucleoside bisphosphate metabolic process IEP Predicted GO
BP GO:0033875 ribonucleoside bisphosphate metabolic process IEP Predicted GO
MF GO:0033926 glycopeptide alpha-N-acetylgalactosaminidase activity IEP Predicted GO
BP GO:0034032 purine nucleoside bisphosphate metabolic process IEP Predicted GO
BP GO:0034035 purine ribonucleoside bisphosphate metabolic process IEP Predicted GO
MF GO:0038023 signaling receptor activity IEP Predicted GO
BP GO:0042278 purine nucleoside metabolic process IEP Predicted GO
BP GO:0042592 homeostatic process IEP Predicted GO
BP GO:0045454 cell redox homeostasis IEP Predicted GO
BP GO:0046128 purine ribonucleoside metabolic process IEP Predicted GO
BP GO:0051179 localization IEP Predicted GO
BP GO:0051234 establishment of localization IEP Predicted GO
BP GO:0055085 transmembrane transport IEP Predicted GO
MF GO:0060089 molecular transducer activity IEP Predicted GO
BP GO:0065008 regulation of biological quality IEP Predicted GO
MF GO:0140103 catalytic activity, acting on a glycoprotein IEP Predicted GO
BP GO:1901068 guanosine-containing compound metabolic process IEP Predicted GO
BP GO:1901657 glycosyl compound metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR001005 SANT/Myb 74 117
IPR001005 SANT/Myb 21 68
No external refs found!