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  5. Solyc08g066570

Solyc08g066570


Description : Regulator of chromosome condensation (RCC1) family protein (AHRD V3.3 *** AT5G11580.1)


Gene families : OG_42_0007852 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0007852_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc08g066570
Cluster HCCA clusters: Cluster_104

Target Alias Description ECC score Gene Family Method Actions
Seita.5G302700.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sopen08g020410 No alias Regulator of chromosome condensation (RCC1) repeat 0.08 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000045 autophagosome assembly IEP Predicted GO
CC GO:0000148 1,3-beta-D-glucan synthase complex IEP Predicted GO
BP GO:0000375 RNA splicing, via transesterification reactions IEP Predicted GO
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Predicted GO
BP GO:0000398 mRNA splicing, via spliceosome IEP Predicted GO
MF GO:0003684 damaged DNA binding IEP Predicted GO
MF GO:0003824 catalytic activity IEP Predicted GO
MF GO:0003843 1,3-beta-D-glucan synthase activity IEP Predicted GO
MF GO:0004096 catalase activity IEP Predicted GO
MF GO:0004150 dihydroneopterin aldolase activity IEP Predicted GO
MF GO:0004435 phosphatidylinositol phospholipase C activity IEP Predicted GO
MF GO:0004470 malic enzyme activity IEP Predicted GO
MF GO:0004471 malate dehydrogenase (decarboxylating) (NAD+) activity IEP Predicted GO
MF GO:0004620 phospholipase activity IEP Predicted GO
MF GO:0004629 phospholipase C activity IEP Predicted GO
MF GO:0005244 voltage-gated ion channel activity IEP Predicted GO
MF GO:0005247 voltage-gated chloride channel activity IEP Predicted GO
MF GO:0005253 anion channel activity IEP Predicted GO
MF GO:0005254 chloride channel activity IEP Predicted GO
MF GO:0005337 nucleoside transmembrane transporter activity IEP Predicted GO
MF GO:0005524 ATP binding IEP Predicted GO
CC GO:0005795 Golgi stack IEP Predicted GO
BP GO:0006074 (1->3)-beta-D-glucan metabolic process IEP Predicted GO
BP GO:0006075 (1->3)-beta-D-glucan biosynthetic process IEP Predicted GO
BP GO:0006289 nucleotide-excision repair IEP Predicted GO
BP GO:0006541 glutamine metabolic process IEP Predicted GO
BP GO:0006760 folic acid-containing compound metabolic process IEP Predicted GO
BP GO:0006772 thiamine metabolic process IEP Predicted GO
BP GO:0006821 chloride transport IEP Predicted GO
BP GO:0007033 vacuole organization IEP Predicted GO
MF GO:0008144 drug binding IEP Predicted GO
BP GO:0008152 metabolic process IEP Predicted GO
MF GO:0008308 voltage-gated anion channel activity IEP Predicted GO
MF GO:0008455 alpha-1,6-mannosylglycoprotein 2-beta-N-acetylglucosaminyltransferase activity IEP Predicted GO
BP GO:0009228 thiamine biosynthetic process IEP Predicted GO
BP GO:0010498 proteasomal protein catabolic process IEP Predicted GO
MF GO:0015108 chloride transmembrane transporter activity IEP Predicted GO
MF GO:0015932 nucleobase-containing compound transmembrane transporter activity IEP Predicted GO
BP GO:0016051 carbohydrate biosynthetic process IEP Predicted GO
MF GO:0016298 lipase activity IEP Predicted GO
MF GO:0016615 malate dehydrogenase activity IEP Predicted GO
MF GO:0016787 hydrolase activity IEP Predicted GO
MF GO:0016832 aldehyde-lyase activity IEP Predicted GO
MF GO:0016887 ATPase activity IEP Predicted GO
MF GO:0022832 voltage-gated channel activity IEP Predicted GO
CC GO:0030119 AP-type membrane coat adaptor complex IEP Predicted GO
CC GO:0030131 clathrin adaptor complex IEP Predicted GO
BP GO:0030163 protein catabolic process IEP Predicted GO
BP GO:0030259 lipid glycosylation IEP Predicted GO
CC GO:0031984 organelle subcompartment IEP Predicted GO
BP GO:0042558 pteridine-containing compound metabolic process IEP Predicted GO
MF GO:0042578 phosphoric ester hydrolase activity IEP Predicted GO
BP GO:0042723 thiamine-containing compound metabolic process IEP Predicted GO
BP GO:0042724 thiamine-containing compound biosynthetic process IEP Predicted GO
BP GO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process IEP Predicted GO
CC GO:0044425 membrane part IEP Predicted GO
MF GO:0050664 oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor IEP Predicted GO
BP GO:0070925 organelle assembly IEP Predicted GO
BP GO:0071704 organic substance metabolic process IEP Predicted GO
CC GO:0098791 Golgi subcompartment IEP Predicted GO
MF GO:1901505 carbohydrate derivative transmembrane transporter activity IEP Predicted GO
BP GO:1905037 autophagosome organization IEP Predicted GO
InterPro domains Description Start Stop
IPR000408 Reg_chr_condens 310 355
IPR000408 Reg_chr_condens 247 296
IPR000408 Reg_chr_condens 35 88
No external refs found!