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  5. LOC_Os08g01570

LOC_Os08g01570


Description : retrotransposon protein, putative, unclassified, expressed


Gene families : OG_42_0000428 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000428_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os08g01570
Cluster HCCA clusters: cluster_0086

Target Alias Description ECC score Gene Family Method Actions
LOC_Os05g24080 No alias hypothetical protein 0.02 Orthogroups_2024-Update
Seita.2G019700.1 No alias RNA editing factor *(MORF) 0.03 Orthogroups_2024-Update
Sobic.005G098600.1 No alias Unknown function 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004852 uroporphyrinogen-III synthase activity IEP Predicted GO
MF GO:0016836 hydro-lyase activity IEP Predicted GO
BP GO:0017038 protein import IEP Predicted GO
BP GO:0033013 tetrapyrrole metabolic process IEP Predicted GO
BP GO:0033014 tetrapyrrole biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR024752 Myb/SANT-like_dom 364 458
IPR027806 HARBI1_dom 156 316
No external refs found!