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  5. LOC_Os08g01740

LOC_Os08g01740


Description : VHS and GAT domain containing protein, expressed


Gene families : OG_42_0000585 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000585_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os08g01740
Cluster HCCA clusters: cluster_0066

Target Alias Description ECC score Gene Family Method Actions
Brara.F01534.1 No alias ubiquitin adaptor protein *(TOL) 0.03 Orthogroups_2024-Update
GRMZM2G023105 No alias ENTH/VHS/GAT family protein 0.03 Orthogroups_2024-Update
HORVU3Hr1G031360.9 No alias ubiquitin adaptor protein *(TOL) 0.02 Orthogroups_2024-Update
HORVU7Hr1G025620.5 No alias ubiquitin adaptor protein *(TOL) 0.03 Orthogroups_2024-Update
HORVU7Hr1G077230.1 No alias ubiquitin adaptor protein *(TOL) 0.04 Orthogroups_2024-Update
Potri.004G138600 No alias ENTH/VHS/GAT family protein 0.03 Orthogroups_2024-Update
Potri.016G131900 No alias ENTH/VHS/GAT family protein 0.04 Orthogroups_2024-Update
Potri.018G039100 No alias ENTH/VHS/GAT family protein 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0005622 intracellular IEA InterProScan predictions
BP GO:0006886 intracellular protein transport IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0019915 lipid storage IEP Predicted GO
BP GO:0051235 maintenance of location IEP Predicted GO
InterPro domains Description Start Stop
IPR002014 VHS_dom 4 110
IPR004152 GAT_dom 194 266
No external refs found!