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  5. LOC_Os08g02220

LOC_Os08g02220


Description : endoglucanase, putative, expressed


Gene families : OG_42_0000077 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000077_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os08g02220
Cluster HCCA clusters: cluster_0061

Target Alias Description ECC score Gene Family Method Actions
85183 No alias glycosyl hydrolase 9A4 0.01 Orthogroups_2024-Update
A4A49_10919 No alias endoglucanase 5 0.03 Orthogroups_2024-Update
At1g70710 No alias Endoglucanase 8 [Source:UniProtKB/Swiss-Prot;Acc:Q9CAC1] 0.02 Orthogroups_2024-Update
Glyma.06G323100 No alias cellulase 3 0.02 Orthogroups_2024-Update
HORVU2Hr1G120100.1 No alias class-C endo-1,4-beta-glucanase 0.03 Orthogroups_2024-Update
LOC_Os08g29770 No alias endoglucanase, putative, expressed 0.02 Orthogroups_2024-Update
PSME_00033700-RA No alias (at4g11050 : 728.0) glycosyl hydrolase 9C3 (GH9C3);... 0.02 Orthogroups_2024-Update
Pp1s149_10V6 No alias endo-beta- -glucanase 0.02 Orthogroups_2024-Update
Seita.1G314100.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Seita.6G133700.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.004G244600.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.010G101900.2 No alias Unknown function 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEA InterProScan predictions
BP GO:0005975 carbohydrate metabolic process IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0005544 calcium-dependent phospholipid binding IEP Predicted GO
MF GO:0008097 5S rRNA binding IEP Predicted GO
BP GO:0016458 gene silencing IEP Predicted GO
MF GO:0019843 rRNA binding IEP Predicted GO
BP GO:0031047 gene silencing by RNA IEP Predicted GO
InterPro domains Description Start Stop
IPR001701 Glyco_hydro_9 55 515
No external refs found!