LOC_Os08g02300

Description : no apical meristem protein, putative, expressed

Gene families : OG_42_0000017 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000017_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Oryza release: LOC_Os08g02300
Cluster	HCCA clusters: cluster_0129

Target	Alias	Description	ECC score	Gene Family Method
At4g36160	No alias	NAC domain containing protein 76 [Source:TAIR;Acc:AT4G36160]	0.02	Orthogroups_2024-Update
Brara.A00235.1	No alias	NAC-type transcription factor	0.02	Orthogroups_2024-Update
Brara.B02268.1	No alias	NAC-type transcription factor	0.03	Orthogroups_2024-Update
Brara.B03811.1	No alias	NAC-type transcription factor	0.03	Orthogroups_2024-Update
Brara.F03105.1	No alias	NAC-type transcription factor	0.02	Orthogroups_2024-Update
Brara.F03613.1	No alias	NAC-type transcription factor	0.02	Orthogroups_2024-Update
Brara.G01307.1	No alias	NAC-type transcription factor	0.02	Orthogroups_2024-Update
Brara.I04275.1	No alias	NAC-type transcription factor & transcriptional...	0.01	Orthogroups_2024-Update
GRMZM2G091490	No alias	NAC (No Apical Meristem) domain transcriptional...	0.03	Orthogroups_2024-Update
Glyma.05G113000	No alias	NAC domain containing protein 71	0.02	Orthogroups_2024-Update
HORVU7Hr1G075550.1	No alias	NAC-type transcription factor & transcriptional...	0.01	Orthogroups_2024-Update
MA_109677g0010	No alias	(at5g61430 : 282.0) NAC domain containing protein 100...	0.02	Orthogroups_2024-Update
PSME_00009079-RA	No alias	(at1g65910 : 290.0) NAC domain containing protein 28...	0.02	Orthogroups_2024-Update
Potri.012G001400	No alias	NAC domain containing protein 100	0.02	Orthogroups_2024-Update
Pp1s223_12V6	No alias	nac domain ipr003441	0.02	Orthogroups_2024-Update
Seita.5G403000.1	No alias	NAC-type transcription factor	0.03	Orthogroups_2024-Update
Sobic.001G386000.1	No alias	NAC-type transcription factor	0.03	Orthogroups_2024-Update
Sobic.006G279400.1	No alias	NAC-type transcription factor	0.02	Orthogroups_2024-Update
Solyc08g079120	No alias	NAC domain protein, (AHRD V3.3 *** A0A061G3J0_THECC)	0.02	Orthogroups_2024-Update
Sopen02g032870	No alias	No apical meristem (NAM) protein	0.02	Orthogroups_2024-Update
Sopen06g021280	No alias	No apical meristem (NAM) protein	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	InterProScan predictions
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	InterProScan predictions
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004146	dihydrofolate reductase activity	IEP	Predicted GO
BP	GO:0006575	cellular modified amino acid metabolic process	IEP	Predicted GO
BP	GO:0006760	folic acid-containing compound metabolic process	IEP	Predicted GO
BP	GO:0009396	folic acid-containing compound biosynthetic process	IEP	Predicted GO
MF	GO:0016645	oxidoreductase activity, acting on the CH-NH group of donors	IEP	Predicted GO
MF	GO:0016646	oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor	IEP	Predicted GO
CC	GO:0030014	CCR4-NOT complex	IEP	Predicted GO
BP	GO:0042398	cellular modified amino acid biosynthetic process	IEP	Predicted GO
BP	GO:0042558	pteridine-containing compound metabolic process	IEP	Predicted GO
BP	GO:0042559	pteridine-containing compound biosynthetic process	IEP	Predicted GO
BP	GO:0046653	tetrahydrofolate metabolic process	IEP	Predicted GO
BP	GO:0046654	tetrahydrofolate biosynthetic process	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR003441	NAC-dom	12	139

External Links

No external refs found!

LOC_Os08g02300

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation