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  5. LOC_Os08g02330

LOC_Os08g02330


Description : RNA recognition motif containing protein, putative, expressed


Gene families : OG_42_0000604 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000604_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os08g02330
Cluster HCCA clusters: cluster_0066

Target Alias Description ECC score Gene Family Method Actions
Brara.I02358.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Brara.I02677.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Glyma.04G229400 No alias CTC-interacting domain 11 0.03 Orthogroups_2024-Update
Kfl00044_0070 kfl00044_0070_v1.1 (at4g10610 : 313.0) RNA-binding protein, putative.... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEP Predicted GO
BP GO:0006904 vesicle docking involved in exocytosis IEP Predicted GO
BP GO:0016192 vesicle-mediated transport IEP Predicted GO
BP GO:0022406 membrane docking IEP Predicted GO
CC GO:0030117 membrane coat IEP Predicted GO
MF GO:0031072 heat shock protein binding IEP Predicted GO
BP GO:0048278 vesicle docking IEP Predicted GO
MF GO:0051082 unfolded protein binding IEP Predicted GO
BP GO:0051640 organelle localization IEP Predicted GO
BP GO:0051641 cellular localization IEP Predicted GO
BP GO:0140029 exocytic process IEP Predicted GO
BP GO:0140056 organelle localization by membrane tethering IEP Predicted GO
InterPro domains Description Start Stop
IPR000504 RRM_dom 216 283
IPR000504 RRM_dom 119 181
IPR009818 Ataxin-2_C 33 46
No external refs found!