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  5. LOC_Os08g02860

LOC_Os08g02860


Description : transposon protein, putative, unclassified, expressed


Gene families : OG_42_0000353 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000353_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os08g02860
Cluster HCCA clusters: cluster_0107

Target Alias Description ECC score Gene Family Method Actions
At3g26020 No alias Serine/threonine protein phosphatase 2A regulatory... 0.02 Orthogroups_2024-Update
Bradi1g52760 No alias Protein phosphatase 2A regulatory B subunit family protein 0.03 Orthogroups_2024-Update
Brara.C04431.1 No alias regulatory component B1 of PP2A phosphatase complexes 0.02 Orthogroups_2024-Update
Brara.F02746.1 No alias regulatory component B1 of PP2A phosphatase complexes 0.02 Orthogroups_2024-Update
GRMZM2G058525 No alias Protein phosphatase 2A regulatory B subunit family protein 0.02 Orthogroups_2024-Update
Glyma.11G246900 No alias Protein phosphatase 2A regulatory B subunit family protein 0.03 Orthogroups_2024-Update
MA_42249g0010 No alias (at4g15415 : 659.0) B' regulatory subunit of PP2A... 0.02 Orthogroups_2024-Update
Pp1s84_258V6 No alias protein phosphatase regulatory 0.01 Orthogroups_2024-Update
Sobic.003G045000.1 No alias regulatory component B1 of PP2A phosphatase complexes 0.03 Orthogroups_2024-Update
Solyc09g008400 No alias Serine/threonine protein phosphatase 2A regulatory... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0000159 protein phosphatase type 2A complex IEA InterProScan predictions
BP GO:0007165 signal transduction IEA InterProScan predictions
MF GO:0019888 protein phosphatase regulator activity IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0000184 nuclear-transcribed mRNA catabolic process, nonsense-mediated decay IEP Predicted GO
BP GO:0000956 nuclear-transcribed mRNA catabolic process IEP Predicted GO
MF GO:0003723 RNA binding IEP Predicted GO
MF GO:0003880 protein C-terminal carboxyl O-methyltransferase activity IEP Predicted GO
MF GO:0004190 aspartic-type endopeptidase activity IEP Predicted GO
MF GO:0004671 protein C-terminal S-isoprenylcysteine carboxyl O-methyltransferase activity IEP Predicted GO
MF GO:0004842 ubiquitin-protein transferase activity IEP Predicted GO
BP GO:0006367 transcription initiation from RNA polymerase II promoter IEP Predicted GO
BP GO:0006401 RNA catabolic process IEP Predicted GO
BP GO:0006402 mRNA catabolic process IEP Predicted GO
BP GO:0006479 protein methylation IEP Predicted GO
BP GO:0006481 C-terminal protein methylation IEP Predicted GO
BP GO:0006914 autophagy IEP Predicted GO
MF GO:0008171 O-methyltransferase activity IEP Predicted GO
BP GO:0008213 protein alkylation IEP Predicted GO
MF GO:0008276 protein methyltransferase activity IEP Predicted GO
MF GO:0008565 protein transporter activity IEP Predicted GO
MF GO:0010309 acireductone dioxygenase [iron(II)-requiring] activity IEP Predicted GO
MF GO:0010340 carboxyl-O-methyltransferase activity IEP Predicted GO
CC GO:0016021 integral component of membrane IEP Predicted GO
MF GO:0016307 phosphatidylinositol phosphate kinase activity IEP Predicted GO
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Predicted GO
MF GO:0016742 hydroxymethyl-, formyl- and related transferase activity IEP Predicted GO
BP GO:0018410 C-terminal protein amino acid modification IEP Predicted GO
MF GO:0019787 ubiquitin-like protein transferase activity IEP Predicted GO
CC GO:0031224 intrinsic component of membrane IEP Predicted GO
MF GO:0032977 membrane insertase activity IEP Predicted GO
BP GO:0043687 post-translational protein modification IEP Predicted GO
MF GO:0051998 protein carboxyl O-methyltransferase activity IEP Predicted GO
BP GO:0061919 process utilizing autophagic mechanism IEP Predicted GO
MF GO:0070001 aspartic-type peptidase activity IEP Predicted GO
MF GO:0098599 palmitoyl hydrolase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR002554 PP2A_B56 87 498
No external refs found!