LOC_Os08g05750

Description : pentatricopeptide, putative, expressed

Gene families : OG_42_0018786 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Oryza release: LOC_Os08g05750
Cluster	HCCA clusters: cluster_0125

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0008270	zinc ion binding	IEA	InterProScan predictions
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0004807	triose-phosphate isomerase activity	IEP	Predicted GO
CC	GO:0005759	mitochondrial matrix	IEP	Predicted GO
MF	GO:0016837	carbon-oxygen lyase activity, acting on polysaccharides	IEP	Predicted GO
MF	GO:0016860	intramolecular oxidoreductase activity	IEP	Predicted GO
MF	GO:0016861	intramolecular oxidoreductase activity, interconverting aldoses and ketoses	IEP	Predicted GO
MF	GO:0030570	pectate lyase activity	IEP	Predicted GO
CC	GO:0031974	membrane-enclosed lumen	IEP	Predicted GO
CC	GO:0043233	organelle lumen	IEP	Predicted GO
CC	GO:0070013	intracellular organelle lumen	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR032867	DYW_dom	479	603
IPR002885	Pentatricopeptide_repeat	143	172
IPR002885	Pentatricopeptide_repeat	112	140
IPR002885	Pentatricopeptide_repeat	81	109
IPR002885	Pentatricopeptide_repeat	373	404
IPR002885	Pentatricopeptide_repeat	204	252
IPR002885	Pentatricopeptide_repeat	306	352

External Links

No external refs found!