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  5. LOC_Os08g06370

LOC_Os08g06370


Description : MYB family transcription factor, putative, expressed


Gene families : OG_42_0000021 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000021_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os08g06370
Cluster HCCA clusters: cluster_0056

Target Alias Description ECC score Gene Family Method Actions
At5g06800 No alias myb-like HTH transcriptional regulator family protein... 0.03 Orthogroups_2024-Update
Bradi1g17400 No alias myb-related protein 1 0.02 Orthogroups_2024-Update
Bradi1g36236 No alias myb-like HTH transcriptional regulator family protein 0.02 Orthogroups_2024-Update
Bradi3g36710 No alias Homeodomain-like superfamily protein 0.02 Orthogroups_2024-Update
Brara.A03315.1 No alias GARP subgroup PHL transcription factor 0.03 Orthogroups_2024-Update
Brara.B02368.1 No alias regulatory protein *(FE) of florigen biosynthesis & GARP... 0.03 Orthogroups_2024-Update
Brara.B03508.1 No alias GARP subgroup PHL transcription factor & transcription... 0.04 Orthogroups_2024-Update
Brara.F00986.1 No alias transcription factor *(CLAUSA) 0.03 Orthogroups_2024-Update
GRMZM2G052544 No alias Homeodomain-like superfamily protein 0.02 Orthogroups_2024-Update
GRMZM2G090230 No alias Homeodomain-like superfamily protein 0.03 Orthogroups_2024-Update
GRMZM2G454449 No alias Homeodomain-like superfamily protein 0.03 Orthogroups_2024-Update
Glyma.11G213700 No alias Homeodomain-like superfamily protein 0.03 Orthogroups_2024-Update
Glyma.18G043000 No alias Homeodomain-like superfamily protein 0.03 Orthogroups_2024-Update
HORVU2Hr1G095530.2 No alias transcription factor *(CLAUSA) 0.02 Orthogroups_2024-Update
HORVU4Hr1G012040.5 No alias KANADI-type transcription factor 0.03 Orthogroups_2024-Update
HORVU7Hr1G107680.10 No alias transcription factor *(CLAUSA) 0.03 Orthogroups_2024-Update
MA_1432g0010 No alias (at3g13040 : 86.3) myb-like HTH transcriptional... 0.04 Orthogroups_2024-Update
PSME_00036264-RA No alias (at5g29000 : 213.0) Homeodomain-like superfamily... 0.03 Orthogroups_2024-Update
Potri.010G099600 No alias Homeodomain-like superfamily protein 0.02 Orthogroups_2024-Update
Potri.012G042100 No alias Homeodomain-like superfamily protein 0.02 Orthogroups_2024-Update
Potri.013G048000 No alias Homeodomain-like superfamily protein 0.02 Orthogroups_2024-Update
Potri.016G121800 No alias myb-like HTH transcriptional regulator family protein 0.03 Orthogroups_2024-Update
Potri.017G137600 No alias Homeodomain-like superfamily protein 0.02 Orthogroups_2024-Update
Pp1s12_158V6 No alias MUJ8.2; myb family transcription factor [Arabidopsis thaliana] 0.03 Orthogroups_2024-Update
Sobic.010G160900.2 No alias transcription factor *(CLAUSA) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000159 protein phosphatase type 2A complex IEP Predicted GO
BP GO:0002097 tRNA wobble base modification IEP Predicted GO
BP GO:0002098 tRNA wobble uridine modification IEP Predicted GO
BP GO:0006400 tRNA modification IEP Predicted GO
BP GO:0006417 regulation of translation IEP Predicted GO
CC GO:0008287 protein serine/threonine phosphatase complex IEP Predicted GO
BP GO:0009451 RNA modification IEP Predicted GO
BP GO:0009890 negative regulation of biosynthetic process IEP Predicted GO
BP GO:0010558 negative regulation of macromolecule biosynthetic process IEP Predicted GO
BP GO:0010608 posttranscriptional regulation of gene expression IEP Predicted GO
BP GO:0017148 negative regulation of translation IEP Predicted GO
MF GO:0019208 phosphatase regulator activity IEP Predicted GO
MF GO:0019888 protein phosphatase regulator activity IEP Predicted GO
MF GO:0030597 RNA glycosylase activity IEP Predicted GO
MF GO:0030598 rRNA N-glycosylase activity IEP Predicted GO
BP GO:0031324 negative regulation of cellular metabolic process IEP Predicted GO
BP GO:0031327 negative regulation of cellular biosynthetic process IEP Predicted GO
BP GO:0032269 negative regulation of cellular protein metabolic process IEP Predicted GO
CC GO:0033588 Elongator holoenzyme complex IEP Predicted GO
BP GO:0034248 regulation of cellular amide metabolic process IEP Predicted GO
BP GO:0034249 negative regulation of cellular amide metabolic process IEP Predicted GO
BP GO:0051172 negative regulation of nitrogen compound metabolic process IEP Predicted GO
BP GO:0051248 negative regulation of protein metabolic process IEP Predicted GO
MF GO:0140102 catalytic activity, acting on a rRNA IEP Predicted GO
CC GO:1903293 phosphatase complex IEP Predicted GO
BP GO:2000113 negative regulation of cellular macromolecule biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR001005 SANT/Myb 161 212
No external refs found!