1. Home
  2. Species
  3. Oryza sativa
  4. Sequence
  5. LOC_Os08g07380

LOC_Os08g07380


Description : retrotransposon protein, putative, unclassified, expressed


Gene families : OG_42_0000064 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000064_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os08g07380
Cluster HCCA clusters: cluster_0020

Target Alias Description ECC score Gene Family Method Actions
Bradi1g55672 No alias HOPZ-ACTIVATED RESISTANCE 1 0.03 Orthogroups_2024-Update
Bradi4g44550 No alias NB-ARC domain-containing disease resistance protein 0.02 Orthogroups_2024-Update
GRMZM2G098677 No alias NB-ARC domain-containing disease resistance protein 0.02 Orthogroups_2024-Update
HORVU1Hr1G005520.5 No alias Unknown function 0.04 Orthogroups_2024-Update
HORVU7Hr1G023770.19 No alias Unknown function 0.02 Orthogroups_2024-Update
LOC_Os09g07580 No alias mla1, putative, expressed 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA InterProScan predictions
MF GO:0008270 zinc ion binding IEA InterProScan predictions
MF GO:0043531 ADP binding IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP Predicted GO
MF GO:0050664 oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor IEP Predicted GO
InterPro domains Description Start Stop
IPR002182 NB-ARC 720 941
IPR002182 NB-ARC 32 84
IPR001878 Znf_CCHC 271 286
No external refs found!