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  5. Solyc01g088280

Solyc01g088280


Description : Germin family protein (AHRD V3.3 *** G7I5N4_MEDTR)


Gene families : OG_42_0000022 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000022_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc01g088280
Cluster HCCA clusters: Cluster_29

Target Alias Description ECC score Gene Family Method Actions
A4A49_17289 No alias germin-like protein subfamily 3 member 2 0.04 Orthogroups_2024-Update
At5g38960 No alias Putative germin-like protein subfamily 1 member 12... 0.05 Orthogroups_2024-Update
Glyma.20G220800 No alias RmlC-like cupins superfamily protein 0.03 Orthogroups_2024-Update
HORVU0Hr1G009410.1 No alias Unknown function 0.03 Orthogroups_2024-Update
LOC_Os02g29020 No alias Cupin domain containing protein, expressed 0.03 Orthogroups_2024-Update
PSME_00026859-RA No alias (at1g09560 : 257.0) germin-like protein (GLP5);... 0.03 Orthogroups_2024-Update
PSME_00042213-RA No alias (at1g09560 : 119.0) germin-like protein (GLP5);... 0.03 Orthogroups_2024-Update
PSME_00054465-RA No alias (at1g09560 : 210.0) germin-like protein (GLP5);... 0.03 Orthogroups_2024-Update
Potri.004G179800 No alias RmlC-like cupins superfamily protein 0.03 Orthogroups_2024-Update
Potri.013G051600 No alias RmlC-like cupins superfamily protein 0.02 Orthogroups_2024-Update
Seita.9G131200.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.001G050100.1 No alias Unknown function 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0045735 nutrient reservoir activity IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0000041 transition metal ion transport IEP Predicted GO
MF GO:0005375 copper ion transmembrane transporter activity IEP Predicted GO
CC GO:0005811 lipid droplet IEP Predicted GO
BP GO:0006825 copper ion transport IEP Predicted GO
MF GO:0008146 sulfotransferase activity IEP Predicted GO
CC GO:0012511 monolayer-surrounded lipid storage body IEP Predicted GO
MF GO:0016782 transferase activity, transferring sulfur-containing groups IEP Predicted GO
BP GO:0017004 cytochrome complex assembly IEP Predicted GO
BP GO:0035434 copper ion transmembrane transport IEP Predicted GO
MF GO:0046915 transition metal ion transmembrane transporter activity IEP Predicted GO
MF GO:0050664 oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor IEP Predicted GO
InterPro domains Description Start Stop
IPR006045 Cupin_1 2 127
No external refs found!