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LOC_Os08g09670


Description : F-box/LRR-repeat protein 22, putative, expressed


Gene families : OG_42_0000249 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000249_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os08g09670
Cluster HCCA clusters: cluster_0139

Target Alias Description ECC score Gene Family Method Actions
At4g05470 No alias RNI-like superfamily protein [Source:TAIR;Acc:AT4G05470] 0.03 Orthogroups_2024-Update
At5g52480 No alias Nodulin-like protein [Source:UniProtKB/TrEMBL;Acc:Q9FHB4] 0.02 Orthogroups_2024-Update
Bradi1g61973 No alias RNI-like superfamily protein 0.02 Orthogroups_2024-Update
Brara.I00213.1 No alias Unknown function 0.02 Orthogroups_2024-Update
HORVU1Hr1G004970.3 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.007G070300.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.007G070900.2 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.007G090445.1 No alias Unknown function 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0000213 tRNA-intron endonuclease activity IEP Predicted GO
BP GO:0000394 RNA splicing, via endonucleolytic cleavage and ligation IEP Predicted GO
BP GO:0000413 protein peptidyl-prolyl isomerization IEP Predicted GO
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Predicted GO
MF GO:0003950 NAD+ ADP-ribosyltransferase activity IEP Predicted GO
MF GO:0004549 tRNA-specific ribonuclease activity IEP Predicted GO
BP GO:0006388 tRNA splicing, via endonucleolytic cleavage and ligation IEP Predicted GO
BP GO:0006464 cellular protein modification process IEP Predicted GO
BP GO:0008033 tRNA processing IEP Predicted GO
BP GO:0008380 RNA splicing IEP Predicted GO
BP GO:0016579 protein deubiquitination IEP Predicted GO
MF GO:0016763 transferase activity, transferring pentosyl groups IEP Predicted GO
MF GO:0016859 cis-trans isomerase activity IEP Predicted GO
MF GO:0016892 endoribonuclease activity, producing 3'-phosphomonoesters IEP Predicted GO
MF GO:0016894 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 3'-phosphomonoesters IEP Predicted GO
BP GO:0018208 peptidyl-proline modification IEP Predicted GO
MF GO:0030246 carbohydrate binding IEP Predicted GO
BP GO:0036211 protein modification process IEP Predicted GO
BP GO:0043412 macromolecule modification IEP Predicted GO
BP GO:0070646 protein modification by small protein removal IEP Predicted GO
InterPro domains Description Start Stop
IPR001611 Leu-rich_rpt 2 22
IPR001611 Leu-rich_rpt 25 37
No external refs found!