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  5. Solyc01g088300

Solyc01g088300


Description : Germin-like protein 1 (AHRD V3.3 *** B9NCV4_POPTR)


Gene families : OG_42_0000022 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000022_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc01g088300
Cluster HCCA clusters: Cluster_9

Target Alias Description ECC score Gene Family Method Actions
109968 No alias RmlC-like cupins superfamily protein 0.02 Orthogroups_2024-Update
109995 No alias RmlC-like cupins superfamily protein 0.04 Orthogroups_2024-Update
229747 No alias germin-like protein 5 0.04 Orthogroups_2024-Update
271728 No alias RmlC-like cupins superfamily protein 0.03 Orthogroups_2024-Update
92738 No alias RmlC-like cupins superfamily protein 0.03 Orthogroups_2024-Update
A4A49_08369 No alias nectarin-1 0.03 Orthogroups_2024-Update
A4A49_08731 No alias germin-like protein subfamily 1 member 7 0.03 Orthogroups_2024-Update
A4A49_13720 No alias nectarin-1 0.03 Orthogroups_2024-Update
A4A49_16761 No alias nectarin-1 0.03 Orthogroups_2024-Update
A4A49_64273 No alias nectarin-1 0.02 Orthogroups_2024-Update
At3g05930 No alias Germin-like protein subfamily 2 member 3... 0.03 Orthogroups_2024-Update
Bradi1g04907 No alias germin-like protein subfamily 2 member 2 precursor 0.02 Orthogroups_2024-Update
Bradi3g15210 No alias RmlC-like cupins superfamily protein 0.02 Orthogroups_2024-Update
Bradi3g37680 No alias germin-like protein 1 0.03 Orthogroups_2024-Update
Bradi5g21910 No alias RmlC-like cupins superfamily protein 0.02 Orthogroups_2024-Update
GRMZM2G090245 No alias germin-like protein 1 0.05 Orthogroups_2024-Update
GRMZM2G151249 No alias germin-like protein 4 0.03 Orthogroups_2024-Update
Glyma.10G141700 No alias germin-like protein 10 0.02 Orthogroups_2024-Update
HORVU3Hr1G034100.5 No alias Unknown function 0.02 Orthogroups_2024-Update
HORVU4Hr1G090130.1 No alias Unknown function 0.02 Orthogroups_2024-Update
HORVU6Hr1G066380.1 No alias Unknown function 0.02 Orthogroups_2024-Update
HORVU7Hr1G036720.1 No alias Unknown function 0.02 Orthogroups_2024-Update
LOC_Os02g32980 No alias Cupin domain containing protein, expressed 0.03 Orthogroups_2024-Update
LOC_Os04g52720 No alias Cupin domain containing protein, expressed 0.02 Orthogroups_2024-Update
MA_3366g0010 No alias (at1g09560 : 259.0) germin-like protein (GLP5);... 0.03 Orthogroups_2024-Update
Seita.1G180600.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.9G131200.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.001G050100.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Sobic.003G136200.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.003G427700.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Solyc03g113580 No alias Germin-like protein (AHRD V3.3 *** Q8H2A6_ANACO) 0.03 Orthogroups_2024-Update
Sopen09g032950 No alias Cupin 0.02 Orthogroups_2024-Update
Sopen10g029480 No alias Cupin 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0045735 nutrient reservoir activity IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0000062 fatty-acyl-CoA binding IEP Predicted GO
MF GO:0003905 alkylbase DNA N-glycosylase activity IEP Predicted GO
MF GO:0004499 N,N-dimethylaniline monooxygenase activity IEP Predicted GO
MF GO:0005506 iron ion binding IEP Predicted GO
MF GO:0005516 calmodulin binding IEP Predicted GO
BP GO:0006284 base-excision repair IEP Predicted GO
BP GO:0006950 response to stress IEP Predicted GO
BP GO:0006952 defense response IEP Predicted GO
BP GO:0008150 biological_process IEP Predicted GO
BP GO:0008152 metabolic process IEP Predicted GO
MF GO:0008725 DNA-3-methyladenine glycosylase activity IEP Predicted GO
CC GO:0009521 photosystem IEP Predicted GO
CC GO:0009522 photosystem I IEP Predicted GO
CC GO:0009579 thylakoid IEP Predicted GO
BP GO:0009607 response to biotic stimulus IEP Predicted GO
BP GO:0015979 photosynthesis IEP Predicted GO
CC GO:0016021 integral component of membrane IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Predicted GO
MF GO:0016709 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen IEP Predicted GO
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP Predicted GO
MF GO:0019104 DNA N-glycosylase activity IEP Predicted GO
MF GO:0019842 vitamin binding IEP Predicted GO
MF GO:0020037 heme binding IEP Predicted GO
MF GO:0030170 pyridoxal phosphate binding IEP Predicted GO
CC GO:0031224 intrinsic component of membrane IEP Predicted GO
CC GO:0032991 protein-containing complex IEP Predicted GO
MF GO:0033218 amide binding IEP Predicted GO
MF GO:0043565 sequence-specific DNA binding IEP Predicted GO
MF GO:0043733 DNA-3-methylbase glycosylase activity IEP Predicted GO
CC GO:0044425 membrane part IEP Predicted GO
CC GO:0044436 thylakoid part IEP Predicted GO
MF GO:0046906 tetrapyrrole binding IEP Predicted GO
MF GO:0048037 cofactor binding IEP Predicted GO
MF GO:0050662 coenzyme binding IEP Predicted GO
BP GO:0050896 response to stimulus IEP Predicted GO
BP GO:0055114 oxidation-reduction process IEP Predicted GO
MF GO:0070279 vitamin B6 binding IEP Predicted GO
MF GO:0097159 organic cyclic compound binding IEP Predicted GO
CC GO:0098796 membrane protein complex IEP Predicted GO
MF GO:1901363 heterocyclic compound binding IEP Predicted GO
MF GO:1901567 fatty acid derivative binding IEP Predicted GO
MF GO:1901681 sulfur compound binding IEP Predicted GO
InterPro domains Description Start Stop
IPR006045 Cupin_1 76 216
No external refs found!