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  5. LOC_Os08g10604

LOC_Os08g10604


Description : pectinesterase, putative, expressed


Gene families : OG_42_0000087 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000087_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os08g10604
Cluster HCCA clusters: cluster_0030

Target Alias Description ECC score Gene Family Method Actions
Glyma.02G086850 No alias Pectin lyase-like superfamily protein 0.02 Orthogroups_2024-Update
PSME_00045263-RA No alias (at5g19730 : 435.0) Pectin lyase-like superfamily... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0030599 pectinesterase activity IEA InterProScan predictions
BP GO:0042545 cell wall modification IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003779 actin binding IEP Predicted GO
CC GO:0005779 integral component of peroxisomal membrane IEP Predicted GO
MF GO:0008519 ammonium transmembrane transporter activity IEP Predicted GO
BP GO:0015696 ammonium transport IEP Predicted GO
BP GO:0016559 peroxisome fission IEP Predicted GO
CC GO:0031231 intrinsic component of peroxisomal membrane IEP Predicted GO
CC GO:0031300 intrinsic component of organelle membrane IEP Predicted GO
CC GO:0031301 integral component of organelle membrane IEP Predicted GO
MF GO:0043531 ADP binding IEP Predicted GO
CC GO:0044438 microbody part IEP Predicted GO
CC GO:0044439 peroxisomal part IEP Predicted GO
BP GO:0048285 organelle fission IEP Predicted GO
InterPro domains Description Start Stop
IPR000070 Pectinesterase_cat 89 398
No external refs found!