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  5. Solyc08g067610

Solyc08g067610


Description : Pleiotropic drug resistance ABC transporter (AHRD V3.3 *** W0TUG3_ACAMN)


Gene families : OG_42_0000055 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000055_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc08g067610
Cluster HCCA clusters: Cluster_226

Target Alias Description ECC score Gene Family Method Actions
172580 No alias pleiotropic drug resistance 12 0.03 Orthogroups_2024-Update
A4A49_09052 No alias pleiotropic drug resistance protein 1 0.02 Orthogroups_2024-Update
Glyma.03G168000 No alias pleiotropic drug resistance 12 0.04 Orthogroups_2024-Update
Glyma.03G192700 No alias pleiotropic drug resistance 11 0.02 Orthogroups_2024-Update
Glyma.05G011900 No alias pleiotropic drug resistance 4 0.03 Orthogroups_2024-Update
Glyma.07G015800 No alias ABC-2 and Plant PDR ABC-type transporter family protein 0.04 Orthogroups_2024-Update
Glyma.17G206300 No alias pleiotropic drug resistance 12 0.05 Orthogroups_2024-Update
PSME_00007105-RA No alias (q5z9s8|pdr12_orysa : 1898.0) Pleiotropic drug... 0.03 Orthogroups_2024-Update
PSME_00008988-RA No alias (q5z9s8|pdr12_orysa : 1221.0) Pleiotropic drug... 0.03 Orthogroups_2024-Update
PSME_00009473-RA No alias (at2g26910 : 1773.0) pleiotropic drug resistance 4... 0.05 Orthogroups_2024-Update
Potri.010G153700 No alias pleiotropic drug resistance 9 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA InterProScan predictions
CC GO:0016020 membrane IEA InterProScan predictions
MF GO:0016887 ATPase activity IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0004672 protein kinase activity IEP Predicted GO
BP GO:0006352 DNA-templated transcription, initiation IEP Predicted GO
BP GO:0006464 cellular protein modification process IEP Predicted GO
BP GO:0006468 protein phosphorylation IEP Predicted GO
BP GO:0006793 phosphorus metabolic process IEP Predicted GO
BP GO:0006796 phosphate-containing compound metabolic process IEP Predicted GO
BP GO:0008037 cell recognition IEP Predicted GO
MF GO:0016301 kinase activity IEP Predicted GO
BP GO:0016310 phosphorylation IEP Predicted GO
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Predicted GO
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Predicted GO
BP GO:0022414 reproductive process IEP Predicted GO
BP GO:0036211 protein modification process IEP Predicted GO
BP GO:0043412 macromolecule modification IEP Predicted GO
CC GO:0044451 nucleoplasm part IEP Predicted GO
MF GO:0045735 nutrient reservoir activity IEP Predicted GO
BP GO:0048544 recognition of pollen IEP Predicted GO
CC GO:0071821 FANCM-MHF complex IEP Predicted GO
InterPro domains Description Start Stop
IPR013525 ABC_2_trans 506 718
IPR013525 ABC_2_trans 1182 1396
IPR013581 PDR_assoc 723 788
IPR003439 ABC_transporter-like 170 352
IPR003439 ABC_transporter-like 885 1037
IPR029481 ABC_trans_N 85 145
No external refs found!