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  5. LOC_Os08g12410

LOC_Os08g12410


Description : pectinesterase, putative, expressed


Gene families : OG_42_0000087 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000087_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood Oryza release: LOC_Os08g12410
Cluster HCCA clusters: cluster_0121

Target Alias Description ECC score Gene Family Method Actions
165098 No alias Pectin lyase-like superfamily protein 0.02 Orthogroups_2024-Update
A4A49_28049 No alias putative pectinesterase 8 0.02 Orthogroups_2024-Update
At2g47280 No alias Probable pectinesterase 66... 0.02 Orthogroups_2024-Update
At5g47500 No alias Probable pectinesterase 68... 0.02 Orthogroups_2024-Update
Bradi1g21810 No alias Pectin lyase-like superfamily protein 0.03 Orthogroups_2024-Update
Brara.B01312.1 No alias pectin methylesterase 0.02 Orthogroups_2024-Update
Brara.F02821.1 No alias pectin methylesterase 0.04 Orthogroups_2024-Update
Brara.I00335.1 No alias pectin methylesterase 0.03 Orthogroups_2024-Update
Glyma.01G066300 No alias Pectin lyase-like superfamily protein 0.04 Orthogroups_2024-Update
Glyma.02G294700 No alias Pectin lyase-like superfamily protein 0.03 Orthogroups_2024-Update
HORVU2Hr1G032220.4 No alias pectin methylesterase 0.06 Orthogroups_2024-Update
PSME_00045931-RA No alias (at5g47500 : 448.0) Pectin lyase-like superfamily... 0.02 Orthogroups_2024-Update
Pp1s112_177V6 No alias pectin methylesterase 0.02 Orthogroups_2024-Update
Pp1s45_249V6 No alias pectin methylesterase 0.03 Orthogroups_2024-Update
Pp1s55_167V6 No alias pectin methylesterase 0.02 Orthogroups_2024-Update
Sobic.001G490800.1 No alias pectin methylesterase 0.02 Orthogroups_2024-Update
Sopen07g022810 No alias Pectinesterase 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0030599 pectinesterase activity IEA InterProScan predictions
BP GO:0042545 cell wall modification IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000070 Pectinesterase_cat 75 375
No external refs found!