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  5. LOC_Os08g13250

LOC_Os08g13250


Description : speckle-type POZ protein, putative, expressed


Gene families : OG_42_0000025 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000025_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os08g13250
Cluster HCCA clusters: cluster_0056

Target Alias Description ECC score Gene Family Method Actions
Bradi3g18440 No alias BTB-POZ and MATH domain 2 0.02 Orthogroups_2024-Update
Brara.D02411.1 No alias substrate adaptor *(BPM) of CUL3-BTB E3 ubiquitin ligase complex 0.03 Orthogroups_2024-Update
LOC_Os08g41190 No alias MBTB32 - Bric-a-Brac, Tramtrack, Broad Complex BTB... 0.02 Orthogroups_2024-Update
Seita.6G020200.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.6G215700.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Seita.8G191600.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.9G498600.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.007G081701.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.007G082000.1 No alias Unknown function 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003725 double-stranded RNA binding IEP Predicted GO
MF GO:0004568 chitinase activity IEP Predicted GO
BP GO:0006022 aminoglycan metabolic process IEP Predicted GO
BP GO:0006026 aminoglycan catabolic process IEP Predicted GO
BP GO:0006030 chitin metabolic process IEP Predicted GO
BP GO:0006032 chitin catabolic process IEP Predicted GO
BP GO:0006040 amino sugar metabolic process IEP Predicted GO
MF GO:0008061 chitin binding IEP Predicted GO
BP GO:0016998 cell wall macromolecule catabolic process IEP Predicted GO
BP GO:0042737 drug catabolic process IEP Predicted GO
BP GO:0044036 cell wall macromolecule metabolic process IEP Predicted GO
BP GO:0046348 amino sugar catabolic process IEP Predicted GO
BP GO:1901071 glucosamine-containing compound metabolic process IEP Predicted GO
BP GO:1901072 glucosamine-containing compound catabolic process IEP Predicted GO
BP GO:1901136 carbohydrate derivative catabolic process IEP Predicted GO
BP GO:1901565 organonitrogen compound catabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR000210 BTB/POZ_dom 169 277
No external refs found!